Gene Ping_2887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2887 
Symbol 
ID4626223 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3565927 
End bp3566736 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content39% 
IMG OID639798007 
ProductABC transporter ATP-binding protein 
Protein accessionYP_944190 
Protein GI119946510 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.220334 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.384798 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCC CGCTTCACCT TGAAATAAAA AACTTATGCT TCTCTCGAAG TGATAAATTA 
TTATTTAATA ATTTATGTTT TGAGTTTGAG CGCGGTAAAA TCACTGCGAT ATTAGGTCCT
AGTGGCATAG GAAAAACAAC ATTATTAAAA CTTATTGGCG GGCAACTGGC TGTCGATAGT
GGTGAGATAT TTTTTAACCA AAGCGCACTT CATAACTGCT CAACGGATGA ACTTTATCAA
GCACGTAAAA AAATGGGTAT GTTATTTCAA AGTGGCGCAT TATTTAACGA GCTTTCTGTT
TTTGAAAATG TCGCATTTCC TTTACGAGAG CATCACCAAC TCGATCAATC TTTGCTCGAA
ATATTAGTTT TAATGAAGTT AGAAGCGGTT GGTTTAAGGG GAGCACGAGA TTTAATGCCG
CAACAATTAT CCGGTGGCAT GGCGCGCCGT GTCGCATTAG CTCGCGCAAT CGCACTTGAT
CCTGAGCTGA TTATGTATGA TGAGCCGTTT AGCGGGCAAG ATCCTATCTC AATGAATGTG
TTGTTGAAAT TAATTAAACA GCTCAATGAG AATTTAGGCT TGACCTCTAT TATTGTGACC
CATGATGTTA AAGAGGTCTT GTCTATTGCA GATAATGTTT ACGTATTAGC GGATGAGAAA
ATTATTGCGC AAGGCTCTGT CGAGTCAATA CTCGCGCAAA CTGAAAATGA ATTATTACAA
CAGTTTTTGC TGGGCAAAAG TGAAGGGCCT GTCCCTTTCC ATTTCAAAAG CGATGATTTT
CAATCTGATT TACAAAAGGT AAGTCGATAA
 
Protein sequence
MKTPLHLEIK NLCFSRSDKL LFNNLCFEFE RGKITAILGP SGIGKTTLLK LIGGQLAVDS 
GEIFFNQSAL HNCSTDELYQ ARKKMGMLFQ SGALFNELSV FENVAFPLRE HHQLDQSLLE
ILVLMKLEAV GLRGARDLMP QQLSGGMARR VALARAIALD PELIMYDEPF SGQDPISMNV
LLKLIKQLNE NLGLTSIIVT HDVKEVLSIA DNVYVLADEK IIAQGSVESI LAQTENELLQ
QFLLGKSEGP VPFHFKSDDF QSDLQKVSR