Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_2886 |
Symbol | |
ID | 4626222 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 3565151 |
End bp | 3565855 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 639798006 |
Product | ABC-type transporter inner membrane protein |
Protein accession | YP_944189 |
Protein GI | 119946509 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0767] ABC-type transport system involved in resistance to organic solvents, permease component |
TIGRFAM ID | [TIGR00056] conserved hypothetical integral membrane protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.201575 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.797194 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTGTTCC ATACAATGTT CGGCATGCCG CACCCTAAAT TGTTTCCTTT ATTTATCGGA CAGATATTTC AACTTGGTAT TTTATCTTTA CCGATTATAT TAACCGCTGG TTTGTTTATC GGCATGGTAT TAAGCTTACA GGGTTATAAT GTGCTGGTTG ATTATGCTGC CGAGGAAAGT TTAGGCAGCA TGGTGGCTTT ATCGTTATTA AGAGAGTTAG GGCCCGTTGT AACGGCCTTA CTTTTTGCCG GGCGAGCAGG CTCTGCGCTG ACCGCTGAAA TTGGTTTAAT GCAAAGCACC GAGCAAATTG CCAGTATGGA AATGATGGCA GTTTCCCCTC TTAAACGTGT GATAGCACCG CGTTTTCTTG CCGGCATCGT GACGCTGCCG TTGCTAACAT TGATGTTTAA TGTGGTGGCT ATTTGGGGAG GATATTTAAT CGGTGTCTCT TGGATGGGGG TTGATGGCGG AGCGTATTGG TCTGTGATGC AGGGCAGTGT TGATTATCTG CCGGATGTTA TGAATGGCGT GATTAAGAGT ATTGTCTTTG GTGTAATGAT TACCTGGGTA GCACTTTATA ATGGTTATTA TGTGATGCCA AACGCTATCG GTATTAGTCG CTCAACAACA CAGACAGTAG TCGTTTCATC ATTATTAGTG TTAGCAATGG ATTTTATATT AACGGTGTTT ATGTTCGGAG CGTAA
|
Protein sequence | MLFHTMFGMP HPKLFPLFIG QIFQLGILSL PIILTAGLFI GMVLSLQGYN VLVDYAAEES LGSMVALSLL RELGPVVTAL LFAGRAGSAL TAEIGLMQST EQIASMEMMA VSPLKRVIAP RFLAGIVTLP LLTLMFNVVA IWGGYLIGVS WMGVDGGAYW SVMQGSVDYL PDVMNGVIKS IVFGVMITWV ALYNGYYVMP NAIGISRSTT QTVVVSSLLV LAMDFILTVF MFGA
|
| |