Gene Ping_2886 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2886 
Symbol 
ID4626222 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3565151 
End bp3565855 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content43% 
IMG OID639798006 
ProductABC-type transporter inner membrane protein 
Protein accessionYP_944189 
Protein GI119946509 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0767] ABC-type transport system involved in resistance to organic solvents, permease component 
TIGRFAM ID[TIGR00056] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.201575 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.797194 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGTTCC ATACAATGTT CGGCATGCCG CACCCTAAAT TGTTTCCTTT ATTTATCGGA 
CAGATATTTC AACTTGGTAT TTTATCTTTA CCGATTATAT TAACCGCTGG TTTGTTTATC
GGCATGGTAT TAAGCTTACA GGGTTATAAT GTGCTGGTTG ATTATGCTGC CGAGGAAAGT
TTAGGCAGCA TGGTGGCTTT ATCGTTATTA AGAGAGTTAG GGCCCGTTGT AACGGCCTTA
CTTTTTGCCG GGCGAGCAGG CTCTGCGCTG ACCGCTGAAA TTGGTTTAAT GCAAAGCACC
GAGCAAATTG CCAGTATGGA AATGATGGCA GTTTCCCCTC TTAAACGTGT GATAGCACCG
CGTTTTCTTG CCGGCATCGT GACGCTGCCG TTGCTAACAT TGATGTTTAA TGTGGTGGCT
ATTTGGGGAG GATATTTAAT CGGTGTCTCT TGGATGGGGG TTGATGGCGG AGCGTATTGG
TCTGTGATGC AGGGCAGTGT TGATTATCTG CCGGATGTTA TGAATGGCGT GATTAAGAGT
ATTGTCTTTG GTGTAATGAT TACCTGGGTA GCACTTTATA ATGGTTATTA TGTGATGCCA
AACGCTATCG GTATTAGTCG CTCAACAACA CAGACAGTAG TCGTTTCATC ATTATTAGTG
TTAGCAATGG ATTTTATATT AACGGTGTTT ATGTTCGGAG CGTAA
 
Protein sequence
MLFHTMFGMP HPKLFPLFIG QIFQLGILSL PIILTAGLFI GMVLSLQGYN VLVDYAAEES 
LGSMVALSLL RELGPVVTAL LFAGRAGSAL TAEIGLMQST EQIASMEMMA VSPLKRVIAP
RFLAGIVTLP LLTLMFNVVA IWGGYLIGVS WMGVDGGAYW SVMQGSVDYL PDVMNGVIKS
IVFGVMITWV ALYNGYYVMP NAIGISRSTT QTVVVSSLLV LAMDFILTVF MFGA