Gene Ping_2885 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2885 
Symbol 
ID4626221 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3564477 
End bp3564959 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content37% 
IMG OID639798005 
Producthypothetical protein 
Protein accessionYP_944188 
Protein GI119946508 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.827962 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.785076 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATAA ATATGTCTCA GAAAAAAACA GAATTATGGG TTGGCATTTT TGTCATTGGC 
GCAATGATCT CATTGGCCAT ATTAGCTTTT AATGTTGCCG GTCTTTCCTT TAAGGGGGAA
GGCCGCAGTT ATACTCTGTA TGCCAGTTTT TCAAATGTTG GTGGTTTAAA AGTTAGATCG
CCAGTGAAAC TTGGTGGTGT TGTTGTCGGC AGAGTTGAAG AAATTAGTTT AAATAAAGAG
AGTTATATGC CAGTTGTGCG TTTGGCTATG TTCGAAAATA AAGGGTATTA TCCAGAAACC
TCTTCAGTTT CGATTTTAAC CTCGGGTTTA TTAGGTGAGC AATATATCGG CCTGCAACCC
GGTTTTATTA TCGAGGGGGT TAATATGTTA GAAGAAGGAG GACGTTTTGA GGATACTAAA
TCTGCTATCG TTCTTGAAGA TTTAATTGGT CAATTTATCT ATTCAATGAA TAAGGGGGAT
TAA
 
Protein sequence
MEINMSQKKT ELWVGIFVIG AMISLAILAF NVAGLSFKGE GRSYTLYASF SNVGGLKVRS 
PVKLGGVVVG RVEEISLNKE SYMPVVRLAM FENKGYYPET SSVSILTSGL LGEQYIGLQP
GFIIEGVNML EEGGRFEDTK SAIVLEDLIG QFIYSMNKGD