Gene Ping_2878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2878 
Symbol 
ID4626214 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3557215 
End bp3558333 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content39% 
IMG OID639797998 
ProductAFG1 family ATPase 
Protein accessionYP_944181 
Protein GI119946501 
COG category[R] General function prediction only 
COG ID[COG1485] Predicted ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.067299 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCCCCC TAAATTTATA TCGCGCCGAT TTACAAAAAA AGAACTTCTT TGAGGATCCT 
GCACAGGCAA TTGCTATACA GCAGCTGCAA CGTTTGTATA TGGATCTGCA AACACCGCCC
ATTGAAAATA AAAAAAGCAG CGTGTTGTCA CGCTTGATTA ACAAACTATC CACACCAACA
AGCAAAAAAA AGCAATTTAA AGGGATCTAT TTTTATGGCG GGGTGGGCCG TGGTAAAACT
TACCTTGTGG ATCTTTTCTT TCATAGCTTA CCAACAAAGC GCAAACAACG ACTGCACTTC
CATCACTTTA TGCTTAGAGT GCACAAAGAA CTTTCTGAAT TGCAGGGACA GGCGAATCCT
TTAGTTAAAA TTGCGCAAAA GTTCTCATTT GAAACTGATG TTTTGTGTTT TGATGAGTTT
TATGTTGATG ATATAACCGA TGCAATGATT TTAGCCGGCA TGTTAACCGC ATTATTTGAA
CAGGGCATTG TATTGGTTGC AACCTCCAAT ATTCACCCCG ATGATCTTTA TAAAAATGGT
CTGCAACGCG CACGTTTTTT GCCTGTTATT GACTTAGTTA AGGTCCATTG TGAAGTGTTC
AATTTAGACG GTGGGCGCGA TTATCGCATT GGCCGTTTAA TAAACAGTGA AATTTATCAC
TACCCTCTAG ACAGCAGTGC CTCCCTGCAG ATAAAAAATG CCTTTGAAAA TTTAGCGGAT
GGAGATAAAG TTTATGGACA AAATATAGAA ATCAATTCCC GCCTGATCCC CAGCATCGCC
AATAGTATTG ATACCTTAAG TATTGAGTTT GATTCACTTT GTGACGGACC AAGAAGCGTA
TTGGATTATA TTGAAATAGC CATATTATAC CGCACTGTTA TTATCGCGAA TATAAAGCAG
ATGGATGATT TGCATAATGA TATTGTCAGG CGTTTTATTG CGATGGTCGA TGAATTTTAT
GATCACCATG TGGCTGTGGT TATCTCTGCT GAAGTTAAGA TAATGGATCT GTATATTGGA
GAGCAACTTA ATTTTGAATT CCAACGTTGT GTATCACGTT TGTCAGAGAT GCAAAGCAAA
ACCTATTTAA TGCAGGCTCA CCATGTTGAA CAAAAATAA
 
Protein sequence
MTPLNLYRAD LQKKNFFEDP AQAIAIQQLQ RLYMDLQTPP IENKKSSVLS RLINKLSTPT 
SKKKQFKGIY FYGGVGRGKT YLVDLFFHSL PTKRKQRLHF HHFMLRVHKE LSELQGQANP
LVKIAQKFSF ETDVLCFDEF YVDDITDAMI LAGMLTALFE QGIVLVATSN IHPDDLYKNG
LQRARFLPVI DLVKVHCEVF NLDGGRDYRI GRLINSEIYH YPLDSSASLQ IKNAFENLAD
GDKVYGQNIE INSRLIPSIA NSIDTLSIEF DSLCDGPRSV LDYIEIAILY RTVIIANIKQ
MDDLHNDIVR RFIAMVDEFY DHHVAVVISA EVKIMDLYIG EQLNFEFQRC VSRLSEMQSK
TYLMQAHHVE QK