Gene Ping_2877 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2877 
SymbolrplM 
ID4626213 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3556513 
End bp3556941 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content39% 
IMG OID639797997 
Product50S ribosomal protein L13 
Protein accessionYP_944180 
Protein GI119946500 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0102] Ribosomal protein L13 
TIGRFAM ID[TIGR01066] ribosomal protein L13, bacterial type 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.114707 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACTT TTGTTGCTAA ACCAGCTGAA GTCAAACGCG ACTGGTTTGT AGTCGATGCT 
GAAGGTAAAA CTTTAGGCCG TTTGGCTACT GAAATCGCTT TACGTTTACG TGGTAAACAT
AAAGCAGAAT ACACTCCGCA TGTTGATACT GGCGATTACA TCATCGTTAT CAATGCAGAG
AAAATTACTG TAACAGGTAA TAAAGCTAAA GGTAAAATCT ATTATCACCA TACTGGTTTC
ATTGGTGGAA TTAAAGCGAT TAGCTTTGAA GATCTTATCA AGCGCGCACC TGAACGTGTT
ATTGAAAAAG CTGTTAAAGG TATGTTACCA CGTGGCCCAT TAGGTCGTGC AATGTACCGT
AAGTTGAAAG TTTATGCTGG TACTGAGCAT CAACATTCTG CACAGCAACC ACAAGTTTTA
GACATTTAA
 
Protein sequence
MKTFVAKPAE VKRDWFVVDA EGKTLGRLAT EIALRLRGKH KAEYTPHVDT GDYIIVINAE 
KITVTGNKAK GKIYYHHTGF IGGIKAISFE DLIKRAPERV IEKAVKGMLP RGPLGRAMYR
KLKVYAGTEH QHSAQQPQVL DI