Gene Ping_2873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2873 
Symbol 
ID4625655 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3553359 
End bp3554639 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content41% 
IMG OID639797994 
Productfused ubiquinol-cytochrome c reductase and cytochrome b/b6 
Protein accessionYP_944177 
Protein GI119946497 
COG category[C] Energy production and conversion 
COG ID[COG1290] Cytochrome b subunit of the bc complex 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00318002 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTAATA AATTAGTCAC TGGAACAGTC GATTGGATAG ATGCACGGAT CCCGATGACG 
GAAACGTGGA ACAAACATTT AGCGCAATAC CCAACACCGG CCAATTTCAA CTTTTGGTAC
TTTTTTGGTG GCTTAGCCAT GCTGGTTCTG GTTAACCAAA TATTAACCGG TATCTGGTTG
ACAATGCACT ACAACCCCTC TGCGGAATTA GCTTTTGCAT CGGTTGAATA TATTATGCGT
GACGTGCCTT ATGGTTGGTT ATTACGTTAT ATGCATTCAA CAGGCGCTTC TGCGTTCTTT
GTGGTTATCT ATTTACATAT GTTCCGCGGC TTGATTTACG GCTCATACCA AAAACCCCGC
GAGTTAATTT GGATCTTCGG CATGTTGATC TTTCTGGTGT TGATGGCCGA AGCCTTTATG
GGTTACTTAC TTCCTTGGGG ACAGATGTCT TTCTGGGGTG CACAGGTAAT TATCTCTTTA
TTTGGTGCAA TTCCAATTAT TGGCGATGAT TTGACCCTTT GGATACGTGG TGATTATGTA
ATATCAGGTG CAACCTTAAA CCGATTCTTT GCATTACATG TAATAGCATT GCCCTTAGCA
CTGGTTGCTT TAGTCTTTTT ACATCTTATC GCATTGCATG AAGTGGGATC GAATAATCCT
GATGGTATTG ATACTAAAGT GAAAAAAGGA ACCGCTTCTG CTGATGCAAA AGGTAAGTTT
ACTTTCCACA AACAATACAG CGGTAAAAAA GATATTATCG ACTCTATTCC CTTCCACCCT
TACTTTACAG TAAAAGATAT TATGGGGGTT TGTGGATTTT TAATCTTATT CTGTGGGGTT
ATCTTCTTTA TGCCGGAAGG GGGAGGTTAC TTCCTTGAGG CGCCAAATTT TGAACCTGCA
AACGGTTTGA AAACACCGAC ACATATCGCA CCAGTTTGGT ATTACACGCC TTTCTATGCC
ATTTTGCGTG CCATACCCGA CAAGTTAATT GGTGTTATGT TCTTTGGTGG CTCCATTGTA
ATTCTTTTCT TCCTGCCTTG GTTAGACCGT TGCAAGGTAA GATCAATTCG TTACCGTAGT
TGGATACATA AAGCTAATAT TGCACAATTC ATTGTTTGTT TTATTGTCTT AGGTGTATTG
GGGGCTTTGC CCGCAACACC TTTATTAACC ATGTTTGCGC AGGTTGGTAC TGTCGGTTAC
TTCGGTTTCT TTATTGCTCT TTGGCTATAC AGCAAAAACG AAAAAACTAA ACCACTACCA
ACGAGGTTAA CATTCAAATG A
 
Protein sequence
MLNKLVTGTV DWIDARIPMT ETWNKHLAQY PTPANFNFWY FFGGLAMLVL VNQILTGIWL 
TMHYNPSAEL AFASVEYIMR DVPYGWLLRY MHSTGASAFF VVIYLHMFRG LIYGSYQKPR
ELIWIFGMLI FLVLMAEAFM GYLLPWGQMS FWGAQVIISL FGAIPIIGDD LTLWIRGDYV
ISGATLNRFF ALHVIALPLA LVALVFLHLI ALHEVGSNNP DGIDTKVKKG TASADAKGKF
TFHKQYSGKK DIIDSIPFHP YFTVKDIMGV CGFLILFCGV IFFMPEGGGY FLEAPNFEPA
NGLKTPTHIA PVWYYTPFYA ILRAIPDKLI GVMFFGGSIV ILFFLPWLDR CKVRSIRYRS
WIHKANIAQF IVCFIVLGVL GALPATPLLT MFAQVGTVGY FGFFIALWLY SKNEKTKPLP
TRLTFK