Gene Ping_2864 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2864 
Symbol 
ID4625646 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3544221 
End bp3544931 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content44% 
IMG OID639797985 
Productpurine nucleoside phosphorylase 
Protein accessionYP_944168 
Protein GI119946488 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0813] Purine-nucleoside phosphorylase 
TIGRFAM ID[TIGR00107] purine-nucleoside phosphorylase, family 1 (deoD) 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.304471 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACCC CTCATATTAA TGCAGTAGAT GGCGCTTTTG CTGAAACTGT TCTGATGCCC 
GGTGACCCGT TACGCGCAAA ATATATCGCA GAAAACTTTT TGAAAGACGC AGTGCAGGTA
ACAGATGTAC GTAACATGCT TGGTTTTACC GGTACTTATA AAGGCAAACG GGTTTCGGTA
ATGGGCAGTG GTATGGGTAT CCCTTCCTGT TCAATTTATG CAACGGAATT ATTCCGCGAA
TACGGCGTAC AAAATATTAT TCGTGTGGGC AGTTGCGGTG CAGTCAGTCG TGACATTAAG
TTACGGGATG TGATCATTGG AATGGGGGCA TCGACGGATT CTAAAGCAAA CCGTATTCGT
TTTAAAGGTC ATGACTTTGC CGCTATCGCA AGCTATGAAC TGTTAGAAAA AGCAGTTAAT
GCTGCCAGAG CACTCGGCAT TAAAGCGCGT GTGGGTAATA TCTTTTCAGC CGATACCTTC
TACACTCCTG AGCCAGAAGT ATTTGATACG CTTGAAAAAT ACAACATTCT TGGCGTCGAG
ATGGAAGCGG CAGGTTTGTA TGGCGTCGCA GCTGAAGAAG GTAAAAATGC CCTGTGTATT
TTAACCGTAT CGGATCATAT CCGCACAGGT GAAAAAACCA CTTCAGATGA ACGTCAAAGC
AGCTTTAATG AAATGTTGAT CATTGCTTTA GATTCAATTG TTGCCGAATA A
 
Protein sequence
MTTPHINAVD GAFAETVLMP GDPLRAKYIA ENFLKDAVQV TDVRNMLGFT GTYKGKRVSV 
MGSGMGIPSC SIYATELFRE YGVQNIIRVG SCGAVSRDIK LRDVIIGMGA STDSKANRIR
FKGHDFAAIA SYELLEKAVN AARALGIKAR VGNIFSADTF YTPEPEVFDT LEKYNILGVE
MEAAGLYGVA AEEGKNALCI LTVSDHIRTG EKTTSDERQS SFNEMLIIAL DSIVAE