Gene Ping_2861 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2861 
Symbol 
ID4625643 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3540754 
End bp3542007 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content44% 
IMG OID639797982 
Productnucleoside transporter 
Protein accessionYP_944165 
Protein GI119946485 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1972] Nucleoside permease 
TIGRFAM ID[TIGR00804] nucleoside transporter 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATTG TAATGGGTTT AGTCGGAATA TTATCGTTAA TGTTAATCGC GGTAATTTTT 
TCCAGTAATC GAAAAGCAAT TAACTTTCGA ACAATAGGCG GGGCATTTCT TCTTCAGGCG
GCAATACCCG CTTTTGTAAT ATTCACAGAT TCCGGCGCAA GCGTATTGGG CAGTATATCC
AGCGGGGTAC AAGCCGTTAT CGACAGTGCC AATGCAGGTA TCGGATTTCT TTTCGGTGGT
CTTGTTTCCA ATACAATGTT TGAAGTATTC GGCGGAGGTG GTTTTGTTTT TGCGTTTAGA
GTACTGCCAA TCATTATTTT CTTTGCTTCA TTAATGGCCG TGCTTTATTA CATAGGTCTG
ATGCAGTTTA TTATCAAAAT ATTTGGCGGT GGCTTGCAAA AAGCATTGGG CACCAGCAGA
ACCGAGTCCA TGTCAGCGGC GGCCAATGTT TTTGTTGGAC AAACTGAAGC CCCTTTAGTC
GTAAAACCCT ACATAAAAAC CATGACTCGC TCAGAGCTTT TTGCGGTGAT GGCGGGTGGT
TTAGCATCGG TTGCCGGTGC AGTATTAGCA GGTTATGCAT CATTAGGTGT TAGCCTTGAT
TACCTTATTG CCGCATCATT TATGGCCGCG CCCGGTGGTT TACTAATGGC GAAAATATTG
GAGCCTGAAA CAGAAACCCC GATCGACACG TTATCGGAGT CAGATATTGA TGCAGAAGAG
CACAAACCGG TTAATGTTAT CGATGCTGCA GCAGTCGGCG CTGGCGATGG TCTTAGTCTG
GCAATGAATG TCGGTGGTAT GCTGATCGCG TTCATCGCAT TAATCGCATT AGTTAATACT
ATTTTAGGCT CTGTCGGTGG TTTATTTGGT CTCGAAGCCC TGACCCTGCA GCAAATCTTC
GGTTATGTCT TTTCTCCTAT TGCCTTTCTT CTTGGTATCC CATGGTCTGA AGCGATGCAG
GCAGGCAGTT TATTAGGCCA AAAATTGGTG GTTAATGAAT TTGTTGCTTA TATTGACTTT
GTTAGTATTA AAGACACCTT AAGCGAACAC ACTCAGGTCA TTATTACCGT GGCTCTATGC
GGCTTTGCCA ACTTATCTTC TATGGCTATT TTATTAGGTG GTCTGGGTGT ATTGGCTCCT
TCTCGCCGCC CTGATATCGC TCGAATGGGT TTAAAAGCCG TGCTCGCGGG CACTTTATCT
AACTTTATGA GTGCAACTTT GGTTGGTATA TTCTTTGCTT TAAGTGTTGC TTAA
 
Protein sequence
MEIVMGLVGI LSLMLIAVIF SSNRKAINFR TIGGAFLLQA AIPAFVIFTD SGASVLGSIS 
SGVQAVIDSA NAGIGFLFGG LVSNTMFEVF GGGGFVFAFR VLPIIIFFAS LMAVLYYIGL
MQFIIKIFGG GLQKALGTSR TESMSAAANV FVGQTEAPLV VKPYIKTMTR SELFAVMAGG
LASVAGAVLA GYASLGVSLD YLIAASFMAA PGGLLMAKIL EPETETPIDT LSESDIDAEE
HKPVNVIDAA AVGAGDGLSL AMNVGGMLIA FIALIALVNT ILGSVGGLFG LEALTLQQIF
GYVFSPIAFL LGIPWSEAMQ AGSLLGQKLV VNEFVAYIDF VSIKDTLSEH TQVIITVALC
GFANLSSMAI LLGGLGVLAP SRRPDIARMG LKAVLAGTLS NFMSATLVGI FFALSVA