Gene Ping_2834 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2834 
Symbol 
ID4626278 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3482053 
End bp3482859 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content41% 
IMG OID639797956 
ProductABC transporter for amino acids ATP-binding protein 
Protein accessionYP_944139 
Protein GI119946459 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4598] ABC-type histidine transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.341986 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACTA TTTTACCCAT AGAAAATGAA TTAAATTATA TGATATTACC GACACTGTCG 
ATTAAAAATC TCCATAAGTC ATTTGCAGCT AATGAAGTAT TAAAAGGGAT CGATTTAGAA
GCCTACAAAG GCGATGTTAT CTCTATTTTG GGCGCTTCAG GCTCGGGTAA AAGTACTTTA
TTGCGCTGTG TTAATCTTCT GGAAACACCC AGCTCAGGCG AAATCCGGGT GAATGGTGAA
TTGATTGAAA TGAAACAGGA TAAAAAACGG GGTGCAGTGC CCGTTTCAAT TAAGCAAGTT
GAACGTATCC GTTCACGCTT AGCAATGGTT TTTCAAGGTT TTAATTTATG GTCGCATATG
ACCGTTTTAG AAAATGTAAT TGAAGCCCCC GTTCATGTTT TAGGTGTGCC TAAAAAAGAA
GCCATTGAAA AAGCTGACGC TATTTTACAG CGTGTCGGTT TGTATGAAAG AAAATCTTTT
TACCCCGGGC AGCTATCAGG CGGCCAGCAA CAGCGTGTAG CGATTGCACG CGCGCTTGCT
GTTGAGCCTG AAGTGATGTT ATTTGATGAA CCAACATCAG CACTTGATCC TGAACTGGTA
GGGGAAGTCT TAAGTGTTAT GCGCGGGTTA GCTGAAGAGG GACGTACCAT GCTGGTTGTT
ACCCATGAAA TGGCTTTTGC CCGTGATGTG TCTAATAAAG TTATTTTTTT ACATGAAGGT
TTAGTTGAAG AGCAGGGGAA ACCAGAAGAT ATTTTTTCAA ACCCTTCATC TGAACGTTTT
AAACAATTCA TCTCCTCAGT TTACTAA
 
Protein sequence
METILPIENE LNYMILPTLS IKNLHKSFAA NEVLKGIDLE AYKGDVISIL GASGSGKSTL 
LRCVNLLETP SSGEIRVNGE LIEMKQDKKR GAVPVSIKQV ERIRSRLAMV FQGFNLWSHM
TVLENVIEAP VHVLGVPKKE AIEKADAILQ RVGLYERKSF YPGQLSGGQQ QRVAIARALA
VEPEVMLFDE PTSALDPELV GEVLSVMRGL AEEGRTMLVV THEMAFARDV SNKVIFLHEG
LVEEQGKPED IFSNPSSERF KQFISSVY