Gene Ping_2832 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2832 
Symbol 
ID4626276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3480385 
End bp3481125 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content41% 
IMG OID639797954 
ProductABC polar amino acid transporter inner membrane protein 
Protein accessionYP_944137 
Protein GI119946457 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4215] ABC-type arginine transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGAAC TACAAAATTA CTCGGGAATA TTGCTTGAAG GTGCATGGCT AACTATTCAA 
GTGGCATTGC TGTCACTCTT GTTAGCTGTT TTTCTTGGGC TACTGGGGGC CTCGGCTAAA
CTGTCTCATT CTGTTTTTTT AAAAGGCATC GGGACACTGT ATACGACGCT CATTCGTGGT
ATCCCGGACC TGATTTTAAT GCTCCTGATT TTCTTTGGTG GGCAGGTATT AGTCAATAAT
CTCAGTTACA GCTTAAATGA ATGGATCAAC CGGACGTTAA CCGGCTTTAA TCCAAACCAT
GAGTGGGCTG CATATTTACC CGATTATATT AATATTAGCC CTTATATCGC GGGCATTATT
ACCATAGGTT TTATTTTTGG TGCCTATATG GCAGAAACAT TCCGTGGTGC TTTTTTGGCT
GTTGAAAAGG GGCAGTTAGA GGCGGCTACG GCTTATGGTA TGAACAAATA CAAACTGTTT
TTGCGGGTGA TGTTTCCTCA GATGATGCGC CACGCGCTAC CGGGAATAGG AAATAATTGG
TTAGTTTTAT TAAAAACAAC AGCGTTGGTT TCAGTTATCG GTTTACAAGA TATGGTTAAA
ATTGCAGGGG ATGCGGGTGG TTCGACTCAA CAACCTTTTA CCTTTTATAT CGCCATTGCG
CTGGTTTTTC TTTTTTTTAC GTCTGTTTCC AGTCTCCTTT TTAGTTGGGC TGAACGTAAA
TATACAATTA AAACGAGGTA G
 
Protein sequence
MLELQNYSGI LLEGAWLTIQ VALLSLLLAV FLGLLGASAK LSHSVFLKGI GTLYTTLIRG 
IPDLILMLLI FFGGQVLVNN LSYSLNEWIN RTLTGFNPNH EWAAYLPDYI NISPYIAGII
TIGFIFGAYM AETFRGAFLA VEKGQLEAAT AYGMNKYKLF LRVMFPQMMR HALPGIGNNW
LVLLKTTALV SVIGLQDMVK IAGDAGGSTQ QPFTFYIAIA LVFLFFTSVS SLLFSWAERK
YTIKTR