Gene Ping_2831 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2831 
Symbol 
ID4626275 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3479708 
End bp3480382 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content44% 
IMG OID639797953 
ProductABC polar amino acid transporter inner membrane protein 
Protein accessionYP_944136 
Protein GI119946456 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4160] ABC-type arginine/histidine transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTTTT CAATATTTAT TAACGAATAC CAGTTTTACC TTGCGGGTTT ATGGACAACG 
GTGTGGTTAG TGGCACTTTC ATTGTTATTG GGGCTGTTTA TTGCGGTTCC GGTAGGGCTT
CTGCGCAGTA GTGAAAACTG GTTGATTAAG GGGCCTGCCT GGTCTTTTAT GTACTTTTTT
CGGGGAACCC CCCTGTTGGT GCAACTGTTT CTTATTTATT ACGGTGCGGC ACAGTTTGAC
TTGATCCATG AAACTTGGTT ATGGCACTAT TTCCAGGAAG CGTGGTTTTG CGCTCTATTG
GCTTTTACAC TGAATACGGG GGCTTATACT GCTGAAATAA TAAGGGGTGT TATCTCGACA
ATGCCAAAAT CTGAGTTAGA AGCCGCTAAA GCCTACGGTA TGAGTGAACG TCAAATTTTA
CGCCGTATCA CCCTGCCAAA TTCACTACGT CGTGCGCTGC CGGCTTACAG TAACGAAATT
ATCTTTATGA TTCATGGTAG TGCTATTGCC GGCATCGTCA CTATTGTTGA TATCACTGGT
GCTGCGCGGG TAGTCAATGC GCGTTATTAT GCACCCTTTG AGGCTTATTT TGGGGCGGCT
TTATTATATA TGTGCCTGAC ATTCTCAGTC ATTTTTGCTT TTAAAAAATG GGAAAGCCGT
TACTCAACTC GTTAA
 
Protein sequence
MDFSIFINEY QFYLAGLWTT VWLVALSLLL GLFIAVPVGL LRSSENWLIK GPAWSFMYFF 
RGTPLLVQLF LIYYGAAQFD LIHETWLWHY FQEAWFCALL AFTLNTGAYT AEIIRGVIST
MPKSELEAAK AYGMSERQIL RRITLPNSLR RALPAYSNEI IFMIHGSAIA GIVTIVDITG
AARVVNARYY APFEAYFGAA LLYMCLTFSV IFAFKKWESR YSTR