Gene Ping_2821 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2821 
Symbol 
ID4625088 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3469165 
End bp3469911 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content42% 
IMG OID639797943 
ProductABC transporter for amino acids ATP-binding protein 
Protein accessionYP_944126 
Protein GI119946446 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.668457 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAAC AAGAAGTTAT GATCACGATG AAAAATGTTA ATAAGTGGTA TGGTGATTTC 
CATGTGCTTA AAGATATCAA TTTAAATATT AAAAAAGGCG AAAAAGTGGT TATTTGTGGT
CCGTCAGGAT CCGGTAAATC AACCACTATT CGTTGCTTAA ACCACCTTGA AAAATTTCAG
CAGGGCCAAA TCAATATTAA TGGCACAGAG CTGATTGATG ATGTGAAAGT TGTGCGTGAT
ATCCGTGCCC AGGTGGGCAT GGTATTTCAG CATTTTAATC TTTTCCCGCA CCTTTCAGTA
CTGGAAAACT TGGTATTAGC CCCTATTTGG GTACATAACA AACCACGGGC TGAGGCACTT
AAAACGGCTA TGTATTACCT TGAACGCGTT AAAATTGCCG ATCAGGCGCA TAAATACCCG
AATCAGCTTT CAGGGGGCCA GCAACAACGT GTCGCGATTG CCCGCTGCTT ATGTATCAAC
CCTGAAATCA TGCTCTTTGA CGAGCCCACT TCGGCACTCG ATCCTGAGAT GGTATCGGAA
GTACTGGATG TGATGGTTGA ACTGGCCGGT GAAGGGATCA CCATGATTTG TGTGACCCAT
GAAATGGGCT TTGCTAAAAA AGTAGCAGAC CGGGTGATCT TTATGGATGC GGGACAAATT
ATCGAAGAGA ATGAACCCCA TGAATTCTTT GATAATCCGC AATCGGATCG TTTAAAACTC
TTTTTAGATC AGATTTTATC GCATTAA
 
Protein sequence
MSEQEVMITM KNVNKWYGDF HVLKDINLNI KKGEKVVICG PSGSGKSTTI RCLNHLEKFQ 
QGQININGTE LIDDVKVVRD IRAQVGMVFQ HFNLFPHLSV LENLVLAPIW VHNKPRAEAL
KTAMYYLERV KIADQAHKYP NQLSGGQQQR VAIARCLCIN PEIMLFDEPT SALDPEMVSE
VLDVMVELAG EGITMICVTH EMGFAKKVAD RVIFMDAGQI IEENEPHEFF DNPQSDRLKL
FLDQILSH