Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_2820 |
Symbol | |
ID | 4625087 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 3468076 |
End bp | 3469155 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 639797942 |
Product | ABC polar amino acid transporter inner membrane protein |
Protein accession | YP_944125 |
Protein GI | 119946445 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.7628 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGTTT ATACGTTTAA AGAAGCTAAA GCAGCACCCT CAACCAGCAG AGGTGTTCTG TTCTGGTTAC GAGAGAATCT ATTTTCTGAT ATTAAAAATA GTGTCTTAAC CCTGCTGGGT ATTTACATTG TTTATATCAT GATCCCCCCG CTGCTTGACT GGATGATTTT TGATGCAACC TGGAGTGGTA CACAAAAGGA GATTGTTAAC AGTGGTGCAC GATGGATTTT TATCATCGAA AAATTTGACC AGTTTATGTA CGGGTTTTAC CCGGTAGCAG AACACTGGCG TCCAAATTTA GTAGGCTTAA TTTCTATTGC CTTTTTATTA TCGCTGAAGT TTATCCCTAA TATTAAAGTT AAACTCGGGC TAATGTTAAT CTACCCATTT GTCTGTTTTG TACTGATCAG TGGCGGTTGG TTTGGGCTTG AAGAAGTACC CACTGAAAAA TGGGGCGGTT TAATGCTGAC TATACTGGTC GCTGCCGTGG GAATTATTGC CTCATTTCCT ATTGGTATTG TACTGGCCTT AGGACGCCAA TCGGAGATGC CGATTCTAAA AACATTATGT GTCGGATTTA TTGAATTTAT ACGCGGTGTA CCGCTTATTA CCATTTTGTT TATGGCATCA GTTGTCTTAC CGCTGTTTTT TAGTGACGGT ATTGATTTTG ATAAATTATT ACGAGCATTA ATAGGGATCA CGCTATTTCA GTCCGCTTAT ATCGCCGAGG TCATCCGAGG TGGTTTACAG GCCATTCCAA AAGGGCAATA TGAAGCTGCT GAGTCATTAG GCTTAGGTTA CTGGCAAGGC ATGCTTTTAA TCATTCTGCC GCAAGCATTA AAAATATCTA TCCCCAATTT AGTGGGATCG TTTATCTCGC TGTTTAAAGA TACAACACTG GTGTTAATCA TTGGGTTATT TGATGTGCTG GCCATGGTGA CGCTAACCAC CAGTGATGCC CTCTGGTTAG GTTATGAAAT CGAAGGTTAT GTGTTTGTCA CTATGATCTA CTGGGTATGC TGCTTCTCCA TGTCGCAATA CTCAAAATCA GTCGAACGCA AATATCATAC TGAGCATTAA
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Protein sequence | MAVYTFKEAK AAPSTSRGVL FWLRENLFSD IKNSVLTLLG IYIVYIMIPP LLDWMIFDAT WSGTQKEIVN SGARWIFIIE KFDQFMYGFY PVAEHWRPNL VGLISIAFLL SLKFIPNIKV KLGLMLIYPF VCFVLISGGW FGLEEVPTEK WGGLMLTILV AAVGIIASFP IGIVLALGRQ SEMPILKTLC VGFIEFIRGV PLITILFMAS VVLPLFFSDG IDFDKLLRAL IGITLFQSAY IAEVIRGGLQ AIPKGQYEAA ESLGLGYWQG MLLIILPQAL KISIPNLVGS FISLFKDTTL VLIIGLFDVL AMVTLTTSDA LWLGYEIEGY VFVTMIYWVC CFSMSQYSKS VERKYHTEH
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