Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_2819 |
Symbol | |
ID | 4625086 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 3466857 |
End bp | 3468074 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 639797941 |
Product | ABC polar amino acid transporter inner membrane protein |
Protein accession | YP_944124 |
Protein GI | 119946444 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4597] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCCTT TTTCAAAGGC TTGTCTTGTT ATGAATAAAT CACAACTCCC CCCTGCTACC ACCGGCGGCT TATTAAGTAG CCCCAGAAAT CGCGCTATTA TTTTCCAATG TCTTGCGCTG CTCGCTGTGG TTGCCTGTGC ATTTTACTTT ACCAGTAATA TGTTCGACAA TATTGAAAAA CGAGGCATTA CTACCGGTTT TTCATTTTTA GGTGAAACAG CAGGATTTGG CGTAAGTCAG TCACTGATAG CCTATGATGA TACAACGTCT ACTTTTTTAG ATGTCTTTAT TGTCGGCATA CTAAACACTC TTTTAGTTGG AGTGATCGGC ATTATCTGTG CGTCTGTATT TGGATTATTA ATTGGTATTG GCCGTTTATC CTCTAATTTT ATAGTGGCTA AGCTGTCGCT TGTTTATATT GAAACCTTCC GTAATATTCC TATTTTATTA CAAATTTTAT TTTGGTATAA CATTGTGCTT GCGGCCTTAC CCGGCCCGCG CCAGAGTTTT AGCTATTTCG AATCTATTTT CCTAAACAAT CGCGGATTAT TACTCCCTGA GCCTATTTTT CAGTCGGGCA GTATTTTTAT ACTGATTGCT TTTGTTATCG CCTGCACCGC GGTTATTTTT TTAACCCGAT GGGCAAAAAA ACGCCATGAT CAAACAGGTG AAGAGTTCCC CTTAATTAAA GTCTCACTCG CTATCTTAAT AGTATCTCCT TTATTGGCTT ATTTTGTGAC CGGTCAGCCG ATCACCGCTG AATATCCCGC ACTGAAAGGC TTTAACTTTC AAGGTGGTTT AGCTATTATT CCGGAGTTCT TAGCGCTTAC TTTTGCACTC AGCATCTATA CTGCCACTTA CATTGCAGAA GCGGTGCGTG CCGGTATTGA AGCTGTCGCA TCGGGACAAA AAGAAGCAGC AGAATCTCTG GGCTTAAAAA AACATGTCAT TTTACGCAAA GTCGTTTTGC CGCAAGCACT GCGGGTCATT ATTCCGCCGG TCATTAACCA GTATCTTAAC CTGGTGAAAA ACTCTTCCTT GGCCACGGCC ATTGGTTACC CTGAAATTGT GACGCTGTTT TCAGGAACAA CTCTGAATCA AGTGGGTCAG GCTATTGAGA TTATTATGAT GACCATGGCG GTCTACCTCA CCTTCAGTAT TGTTATCTCT CTGCTGCTTA ATTGGGTCAA TGCAAAAATG GAAATAAAAG GAAGATAA
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Protein sequence | MPPFSKACLV MNKSQLPPAT TGGLLSSPRN RAIIFQCLAL LAVVACAFYF TSNMFDNIEK RGITTGFSFL GETAGFGVSQ SLIAYDDTTS TFLDVFIVGI LNTLLVGVIG IICASVFGLL IGIGRLSSNF IVAKLSLVYI ETFRNIPILL QILFWYNIVL AALPGPRQSF SYFESIFLNN RGLLLPEPIF QSGSIFILIA FVIACTAVIF LTRWAKKRHD QTGEEFPLIK VSLAILIVSP LLAYFVTGQP ITAEYPALKG FNFQGGLAII PEFLALTFAL SIYTATYIAE AVRAGIEAVA SGQKEAAESL GLKKHVILRK VVLPQALRVI IPPVINQYLN LVKNSSLATA IGYPEIVTLF SGTTLNQVGQ AIEIIMMTMA VYLTFSIVIS LLLNWVNAKM EIKGR
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