Gene Ping_2813 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2813 
Symbol 
ID4625080 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3459393 
End bp3460361 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content44% 
IMG OID639797935 
Producthypothetical protein 
Protein accessionYP_944118 
Protein GI119946438 
COG category[R] General function prediction only 
COG ID[COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAATC TAAAAGCAAA AAATGCCCTG TTTAACGATA GCCCTTATCA AACCGGTATT 
GATGTCAGCC TAAGCGAATT ATTGTGTTAT AAAAAGCAGG CCAAAATACA ATTAAGGCCG
GCAAACAGCG CTGCTTACAA ACCGCTTTCC GGAAATTATC TGGCCAAAAT CAAAGGCCGG
GGCATGGAGT TTGCCGAAGT ACGTCATTAT CAGGCGGGTG ATGATATACG CAGCATTGAT
TGGTCTGTCA CTGCGCGCAC CGGTAAAGCA CATACCAAGT TATTTCAGGA AGAAAAAGAA
CGTCCGGTTT TTATCCTGTT AGATCTTTCT GACAGTATGA TTTTTGGCAG TCAGTTTGTG
TTTAAGTCAG TGCAGGCCTG TCATCTTGCC GCCCTGCTCA GTTGGCAGGC AAAGCAGCGT
AATGATCGCC TTGGCGGCAT CGTCTTTAAC CAGCAACAAG TGGCTGAACT AAAACCGACC
GGAAGAAATA CTGGTTTAAT GGCATTTCTG CATCAAAGTG CACAACTCTG TGCGAGCCGC
CCCTTTAAAG CGGAACTTCA ATCTCAATCA CAATCACAAT CACAATCATT ATTAGTGCAG
CTTAAACGCC TTTCCTATTT AGTACAGACC GGCAGCCAAG TGCATTTAAT CAGTGATTTT
TCGCAGCTCG ATGAGCAGTG CCAAAAATTA ATTAGCCAGA TCCGCAGGCA TAATCAAATT
AATGCCTGGC AGGTATCTGA TCCGCTGGAG TTAGCCTTAC CCAACAGTGT GCAGCAGGAC
AATCTTAAAA TAAATAGTTT ACAGGGCAGT GGGTTTTTCA AGCAAAAAAA ATCGCTGCAG
GATTACCAGA AGGCAGCCAG TCAACGCCAG CACAAGGTAG CTAAACTGTT TACAAAACAG
GGCATTCCCC TTTATCAGAT TTCAGCTGCA CGCTCATTAT TGGATCAGTT TCATGTCTCT
GCAAAATAA
 
Protein sequence
MTNLKAKNAL FNDSPYQTGI DVSLSELLCY KKQAKIQLRP ANSAAYKPLS GNYLAKIKGR 
GMEFAEVRHY QAGDDIRSID WSVTARTGKA HTKLFQEEKE RPVFILLDLS DSMIFGSQFV
FKSVQACHLA ALLSWQAKQR NDRLGGIVFN QQQVAELKPT GRNTGLMAFL HQSAQLCASR
PFKAELQSQS QSQSQSLLVQ LKRLSYLVQT GSQVHLISDF SQLDEQCQKL ISQIRRHNQI
NAWQVSDPLE LALPNSVQQD NLKINSLQGS GFFKQKKSLQ DYQKAASQRQ HKVAKLFTKQ
GIPLYQISAA RSLLDQFHVS AK