Gene Ping_2807 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2807 
Symbol 
ID4625074 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3453873 
End bp3454889 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content44% 
IMG OID639797930 
Productinner-membrane translocator 
Protein accessionYP_944113 
Protein GI119946433 
COG category[R] General function prediction only 
COG ID[COG4158] Predicted ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAATA CTACTACAAA GAGTTCAACT GCACCTGCTG CTTTAACAAA ATTAGCAGCT 
CAAAAAAATA AATTTTCTCT GCGTCTGATG CTTAAAACCG TTGGCATGTT ACCTGTTCTC
ATTATTTTGT GTATCGGTTT TGAAATGCTG AGCGGGCGTT TTATGTCCTG GAGTAACCTG
TCGATCGTTG CCCAGCAGGC TTCAATAAAT ACGGTATTAG CCGCAGGCAT GACTTTTGTT
ATTTTAACTG GCGGGATAGA TTTATCGGTT GGTTCGATAC TTGCCGCTTC GGCAATGGTT
GCGGTGATCG TCTCCAAATT TCCTGAACTG GGTATGCTCG GCATTCCCGC TGCGCTGTTA
GTTGGTACAT TTTTTGGACT GTTAAACGGC AGCCTCATTG CTTATCTAAA GTTACCTCCT
TTTATTGTCA CTCTGGGGGC TTTGACGGCA GTACGAGGAA TTGCAAGGTT AATGGGCAAC
GATACGACTG TTTTTAACCC TGATATGCCC TTTGATTTTA TTGGTAACGG TACTCTTTTT
GGCATCCCCT GGTTGATTAT TATCGCATTC TTCGTCGTTA TCGTCTCCTG GTTTATATTA
AAAAGAACAG TGTTAGGTAT CCATATTTAT TCTGTAGGGG GTAATGAGAA TGCGGCAAGA
CTGTCAGGTA TTAAAGTTGC CGGCGTATTA CTTTTTGCTT ACGGAATGTC AGGACTACTT
TCCGGGCTAG GCGGGGTTAT GTCAGCTGCC CGTCTGTATG CAGCTAATGG TACACAGCTA
GGTACCGCCT ACGAACTTGA TGCGATCGCG GCCGTTATTT TGGGTGGTAC CAGCTTTGTT
GGAGGAATAG GGTCGATTTG GGGAACTTTA ATTGGGGCAT TAATTATCGC CGTGCTGACT
AACGGGCTGG TTCTAACCGG GGTTCCTGAT GTTTGGCAAT ATATTATCAA AGGCTTAATT
ATTATCGGTG CTGTGGCTTT AGACCGTTAT CGTTTACAGG GCAATACAAG AACATAA
 
Protein sequence
MMNTTTKSST APAALTKLAA QKNKFSLRLM LKTVGMLPVL IILCIGFEML SGRFMSWSNL 
SIVAQQASIN TVLAAGMTFV ILTGGIDLSV GSILAASAMV AVIVSKFPEL GMLGIPAALL
VGTFFGLLNG SLIAYLKLPP FIVTLGALTA VRGIARLMGN DTTVFNPDMP FDFIGNGTLF
GIPWLIIIAF FVVIVSWFIL KRTVLGIHIY SVGGNENAAR LSGIKVAGVL LFAYGMSGLL
SGLGGVMSAA RLYAANGTQL GTAYELDAIA AVILGGTSFV GGIGSIWGTL IGALIIAVLT
NGLVLTGVPD VWQYIIKGLI IIGAVALDRY RLQGNTRT