Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_2800 |
Symbol | |
ID | 4626795 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 3445530 |
End bp | 3446729 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 639797923 |
Product | major facilitator transporter |
Protein accession | YP_944106 |
Protein GI | 119946426 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATAAAAT TACATTCCCC TTCATACAAA CGCGTCACCC TTGGGCTAGG CCTAGGCTCT TTTCTGGTTT TCTGTAACCT CTATTATTTT CAGCCATTAC TGCCCTATTT TATGGACAAA TTTTCGGCCT CTGAACTGCA GGTAAACTGG CTTTTTTCCA GTACTACTTT TGCCGTCGCC TTTTCGCTTA TTCCCTGGGC CATTATTTCT GAAATATATG GTCGAAGACC GGTCATGTTA TGCAGCTTAA TATTAATTCC TTTAGTTAAT CTACTGATGT TTTTTAGTCA GGAGCTGTCA CATTTTATCT TTCTGCGCAC GTTATTAGGC ATCGCACTGG CAGGGTTTAT TGCCGTGGCA GTGGCTTATA TGGCGGAAGA ATTTGAGCCG CAGGCTCTCT TGGTCGCGGT TGGCGGTTAT ATCAGTGCAA ATTCACTCGG CGGTGTTATC GGGCGTATCT ATGGCGGGGT AATGACTGAT TTTGTCGGCT TAAAGTGGAC CATCTTTAGT ATGTCTATTT TGAGTCTAAT TATTTTATTT TTTGTTGTTT CCTTAATCAG TAAACAAAAA CATTTCAAAC CGCAAAAAGC CCGTCTTTAT TATCACAACA GACTGTTATT TGATCATATT AGAAATCCTG CTATTTTTCT TGTGATGATC ATTGGTGGTC TCAATTTTGC AGTCTTTATT AACGTCTATA GCGTGATGGG ATTTAAATTA TCCGCAGCGC CATTATCATT ACCTGCCAGT ATCACATCGT TAATATTCTT ATGTTATTTG ATGGGCACTG TTTCGGCAAA ACTAAGCGGA CGTTGGATAA AGCGTTATTC TGCTATTTCC GGTATTTTGT GTGGCTTAGG AGTGAGTTTT TGCGGCTTAG TGATTATGTT TCTGCCGAAT ATTGCCGCCA TTGTAGTCGG CTTATTATTA TTAAGTGGCG GTGCATTTTT TATCCACTCT CTCGCTTATG GTTACATAGG GAGAAACGTG ACACAGGGTA AATCAACAGC AACCGCTTTA TATCTTGTTT TGTATTATGT AGGAGGCAGT ATTGGCGGTT TTGTGCTGAT ATATTGCTGG CAGCTAGGTG GTTGGCCAGT GGTGTTTGCA GCATGTGCCT TTATTTACCT GTTAATTATA TATTGCGCCT TAACTGTTCA AAAAATAATT ATTCCGGTTG CAGCCCCAAT GCCGTTATAG
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Protein sequence | MIKLHSPSYK RVTLGLGLGS FLVFCNLYYF QPLLPYFMDK FSASELQVNW LFSSTTFAVA FSLIPWAIIS EIYGRRPVML CSLILIPLVN LLMFFSQELS HFIFLRTLLG IALAGFIAVA VAYMAEEFEP QALLVAVGGY ISANSLGGVI GRIYGGVMTD FVGLKWTIFS MSILSLIILF FVVSLISKQK HFKPQKARLY YHNRLLFDHI RNPAIFLVMI IGGLNFAVFI NVYSVMGFKL SAAPLSLPAS ITSLIFLCYL MGTVSAKLSG RWIKRYSAIS GILCGLGVSF CGLVIMFLPN IAAIVVGLLL LSGGAFFIHS LAYGYIGRNV TQGKSTATAL YLVLYYVGGS IGGFVLIYCW QLGGWPVVFA ACAFIYLLII YCALTVQKII IPVAAPMPL
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