Gene Ping_2800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2800 
Symbol 
ID4626795 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3445530 
End bp3446729 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content41% 
IMG OID639797923 
Productmajor facilitator transporter 
Protein accessionYP_944106 
Protein GI119946426 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATAAAAT TACATTCCCC TTCATACAAA CGCGTCACCC TTGGGCTAGG CCTAGGCTCT 
TTTCTGGTTT TCTGTAACCT CTATTATTTT CAGCCATTAC TGCCCTATTT TATGGACAAA
TTTTCGGCCT CTGAACTGCA GGTAAACTGG CTTTTTTCCA GTACTACTTT TGCCGTCGCC
TTTTCGCTTA TTCCCTGGGC CATTATTTCT GAAATATATG GTCGAAGACC GGTCATGTTA
TGCAGCTTAA TATTAATTCC TTTAGTTAAT CTACTGATGT TTTTTAGTCA GGAGCTGTCA
CATTTTATCT TTCTGCGCAC GTTATTAGGC ATCGCACTGG CAGGGTTTAT TGCCGTGGCA
GTGGCTTATA TGGCGGAAGA ATTTGAGCCG CAGGCTCTCT TGGTCGCGGT TGGCGGTTAT
ATCAGTGCAA ATTCACTCGG CGGTGTTATC GGGCGTATCT ATGGCGGGGT AATGACTGAT
TTTGTCGGCT TAAAGTGGAC CATCTTTAGT ATGTCTATTT TGAGTCTAAT TATTTTATTT
TTTGTTGTTT CCTTAATCAG TAAACAAAAA CATTTCAAAC CGCAAAAAGC CCGTCTTTAT
TATCACAACA GACTGTTATT TGATCATATT AGAAATCCTG CTATTTTTCT TGTGATGATC
ATTGGTGGTC TCAATTTTGC AGTCTTTATT AACGTCTATA GCGTGATGGG ATTTAAATTA
TCCGCAGCGC CATTATCATT ACCTGCCAGT ATCACATCGT TAATATTCTT ATGTTATTTG
ATGGGCACTG TTTCGGCAAA ACTAAGCGGA CGTTGGATAA AGCGTTATTC TGCTATTTCC
GGTATTTTGT GTGGCTTAGG AGTGAGTTTT TGCGGCTTAG TGATTATGTT TCTGCCGAAT
ATTGCCGCCA TTGTAGTCGG CTTATTATTA TTAAGTGGCG GTGCATTTTT TATCCACTCT
CTCGCTTATG GTTACATAGG GAGAAACGTG ACACAGGGTA AATCAACAGC AACCGCTTTA
TATCTTGTTT TGTATTATGT AGGAGGCAGT ATTGGCGGTT TTGTGCTGAT ATATTGCTGG
CAGCTAGGTG GTTGGCCAGT GGTGTTTGCA GCATGTGCCT TTATTTACCT GTTAATTATA
TATTGCGCCT TAACTGTTCA AAAAATAATT ATTCCGGTTG CAGCCCCAAT GCCGTTATAG
 
Protein sequence
MIKLHSPSYK RVTLGLGLGS FLVFCNLYYF QPLLPYFMDK FSASELQVNW LFSSTTFAVA 
FSLIPWAIIS EIYGRRPVML CSLILIPLVN LLMFFSQELS HFIFLRTLLG IALAGFIAVA
VAYMAEEFEP QALLVAVGGY ISANSLGGVI GRIYGGVMTD FVGLKWTIFS MSILSLIILF
FVVSLISKQK HFKPQKARLY YHNRLLFDHI RNPAIFLVMI IGGLNFAVFI NVYSVMGFKL
SAAPLSLPAS ITSLIFLCYL MGTVSAKLSG RWIKRYSAIS GILCGLGVSF CGLVIMFLPN
IAAIVVGLLL LSGGAFFIHS LAYGYIGRNV TQGKSTATAL YLVLYYVGGS IGGFVLIYCW
QLGGWPVVFA ACAFIYLLII YCALTVQKII IPVAAPMPL