Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_2768 |
Symbol | |
ID | 4623787 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 3405754 |
End bp | 3406899 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 639797891 |
Product | putative ABC transporter solute-binding protein |
Protein accession | YP_944074 |
Protein GI | 119946394 |
COG category | [R] General function prediction only |
COG ID | [COG4134] ABC-type uncharacterized transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.211813 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.195627 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAT TAATCACTCT GTTCAGCCTG TTACTACTGA CAACCTTTGC TCAGGCAGAA GATGTAAATT GGCAGAAGAT TGAAGAAAAA GCTCAGAGTC AAACAGTTTA TTTTTACGCT TGGGGTGGCA GTCAGGATAT TAACAACTAT TTACGCTGGG CAGATAAACG CCTACAAGCA GAATACGGTG TCACCCTAAA ACACGTAAAA GTCACCGATA TCTCTGAAGC CATTACGCGT CTAGTAGCAG AAAAAAGCGC CAACAAAAAT AGCAATGGCA GTATTGATAT GGTTTGGATT AATGGCGAAA ACTTTAAATC AATGAAGGAC TTTAATCTAT TAACCGAGCC CTTTGTAACC AATCTTCCTA ACTGGCAATA TGTTGATAAA TCACTGCCCG TAGACAGTGA TTTTGCAGAG CCGACACTAG GGTTAGAAGC CCCATGGGGC GTTGGGCAGC TGGTGTTTAT TTATGACAAA AATAAAGTAG ATAATCCACC GCAGAGCCAT AGCGAAATGC TGGTATATGC AAAGAGCCAT CCAAATAAAC TCAGTTATCC CCGCCCGCCT TCATTTCATG GTACCAGTTT TCTTAAATCT GCATTGATCG AACTCAGTGA AAATCCTGAC GCTTTGTATT CGCCCGTTGA TGACACTACT TTTGCACAGA TAACTGCACC CTTATGGTCA TATTTAGAGG ACTTTCATCA GGTTGCCTGG CGTCAAGGTA AACAGTTCCC GGCTAACAGT GCGGAAACAC TGCAATTACT TGATGATGGT GAATTAGACT TGGCTATCTC CTTTAATCCT AATGAAGTAT TTAGTGCCCA GGCAAACGGT TTATTAAGAG ATTCAACCAC AGCTTATGCG CTTGCAGCCG GTGCACTGTC TAATATTCAC TTCCTGTCAA TTCCCTGGAA TGCCGCTGCA AAAGAGGGTG CGCTAGTGGC GATTAATTTT CTGCTCAGCC CTGAAGCACA GCTAAAAAAA GCAGATATTT CGGTCTGGGG TGATCCGACT GTTTTACAAT CATCAAAGGT CAGTAGTTCG AGCCAAAAAA CAACTTTATT TAAATCCATT AGTGAGCCGC ACCCCAGTTG GCAAATCGCC CTGGAAACTG AATGGCAAAA AAGATATGGT CATTAA
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Protein sequence | MKKLITLFSL LLLTTFAQAE DVNWQKIEEK AQSQTVYFYA WGGSQDINNY LRWADKRLQA EYGVTLKHVK VTDISEAITR LVAEKSANKN SNGSIDMVWI NGENFKSMKD FNLLTEPFVT NLPNWQYVDK SLPVDSDFAE PTLGLEAPWG VGQLVFIYDK NKVDNPPQSH SEMLVYAKSH PNKLSYPRPP SFHGTSFLKS ALIELSENPD ALYSPVDDTT FAQITAPLWS YLEDFHQVAW RQGKQFPANS AETLQLLDDG ELDLAISFNP NEVFSAQANG LLRDSTTAYA LAAGALSNIH FLSIPWNAAA KEGALVAINF LLSPEAQLKK ADISVWGDPT VLQSSKVSSS SQKTTLFKSI SEPHPSWQIA LETEWQKRYG H
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