Gene Ping_2768 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2768 
Symbol 
ID4623787 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3405754 
End bp3406899 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content42% 
IMG OID639797891 
Productputative ABC transporter solute-binding protein 
Protein accessionYP_944074 
Protein GI119946394 
COG category[R] General function prediction only 
COG ID[COG4134] ABC-type uncharacterized transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.211813 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.195627 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAT TAATCACTCT GTTCAGCCTG TTACTACTGA CAACCTTTGC TCAGGCAGAA 
GATGTAAATT GGCAGAAGAT TGAAGAAAAA GCTCAGAGTC AAACAGTTTA TTTTTACGCT
TGGGGTGGCA GTCAGGATAT TAACAACTAT TTACGCTGGG CAGATAAACG CCTACAAGCA
GAATACGGTG TCACCCTAAA ACACGTAAAA GTCACCGATA TCTCTGAAGC CATTACGCGT
CTAGTAGCAG AAAAAAGCGC CAACAAAAAT AGCAATGGCA GTATTGATAT GGTTTGGATT
AATGGCGAAA ACTTTAAATC AATGAAGGAC TTTAATCTAT TAACCGAGCC CTTTGTAACC
AATCTTCCTA ACTGGCAATA TGTTGATAAA TCACTGCCCG TAGACAGTGA TTTTGCAGAG
CCGACACTAG GGTTAGAAGC CCCATGGGGC GTTGGGCAGC TGGTGTTTAT TTATGACAAA
AATAAAGTAG ATAATCCACC GCAGAGCCAT AGCGAAATGC TGGTATATGC AAAGAGCCAT
CCAAATAAAC TCAGTTATCC CCGCCCGCCT TCATTTCATG GTACCAGTTT TCTTAAATCT
GCATTGATCG AACTCAGTGA AAATCCTGAC GCTTTGTATT CGCCCGTTGA TGACACTACT
TTTGCACAGA TAACTGCACC CTTATGGTCA TATTTAGAGG ACTTTCATCA GGTTGCCTGG
CGTCAAGGTA AACAGTTCCC GGCTAACAGT GCGGAAACAC TGCAATTACT TGATGATGGT
GAATTAGACT TGGCTATCTC CTTTAATCCT AATGAAGTAT TTAGTGCCCA GGCAAACGGT
TTATTAAGAG ATTCAACCAC AGCTTATGCG CTTGCAGCCG GTGCACTGTC TAATATTCAC
TTCCTGTCAA TTCCCTGGAA TGCCGCTGCA AAAGAGGGTG CGCTAGTGGC GATTAATTTT
CTGCTCAGCC CTGAAGCACA GCTAAAAAAA GCAGATATTT CGGTCTGGGG TGATCCGACT
GTTTTACAAT CATCAAAGGT CAGTAGTTCG AGCCAAAAAA CAACTTTATT TAAATCCATT
AGTGAGCCGC ACCCCAGTTG GCAAATCGCC CTGGAAACTG AATGGCAAAA AAGATATGGT
CATTAA
 
Protein sequence
MKKLITLFSL LLLTTFAQAE DVNWQKIEEK AQSQTVYFYA WGGSQDINNY LRWADKRLQA 
EYGVTLKHVK VTDISEAITR LVAEKSANKN SNGSIDMVWI NGENFKSMKD FNLLTEPFVT
NLPNWQYVDK SLPVDSDFAE PTLGLEAPWG VGQLVFIYDK NKVDNPPQSH SEMLVYAKSH
PNKLSYPRPP SFHGTSFLKS ALIELSENPD ALYSPVDDTT FAQITAPLWS YLEDFHQVAW
RQGKQFPANS AETLQLLDDG ELDLAISFNP NEVFSAQANG LLRDSTTAYA LAAGALSNIH
FLSIPWNAAA KEGALVAINF LLSPEAQLKK ADISVWGDPT VLQSSKVSSS SQKTTLFKSI
SEPHPSWQIA LETEWQKRYG H