| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_2766 |
|---|
| Symbol | |
|---|
| ID | 4623785 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | + |
|---|
| Start bp | 3402676 |
|---|
| End bp | 3403152 |
|---|
| Gene Length | 477 bp |
|---|
| Protein Length | 158 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 639797889 |
|---|
| Product | thioesterase superfamily protein |
|---|
| Protein accession | YP_944072 |
|---|
| Protein GI | 119946392 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1607] Acyl-CoA hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00729283 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.4675 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGC CCCAAAGAGA CATCACCCTA CGTTTTTTAG CTGAACCTCA AGATGTTAAT
TTTGGTGGAA AGGTACATGG TGGAGCAGTA ATGAGATGGA TCGATTTAGC GGCATATGCT
TGTGCCGCGG GCTGGAGCGG TCATTATTGT GTTACTGCCT ATGCTGGCGG GATCAGATTT
GTCACACCTA TTCATGTCGG TAGCCTGGTT GAGGTGGAGG CGAAAGTGAT TTATACGGGA
AAATCCTCGA TGCATATTGC CCTTGAAGTA AATGCTTGTG ATCCAAAATC GTTAAACAGA
CGTTTGACGA CACATTGCAT CGTCATTATG GTGGCGGTCG ATGCACATAG CCATCCGATT
TATGTTCCAG CATGGGTGCC GGAAAGCGAA GAGGATATAC AACAGAATGA AACTGCCCGT
AAACTGATGG AAATGCGTAA AAAAATTGGT GAAGAAATGC AAATATTTGT TGAATAA
|
|---|
| Protein sequence | MKKPQRDITL RFLAEPQDVN FGGKVHGGAV MRWIDLAAYA CAAGWSGHYC VTAYAGGIRF
VTPIHVGSLV EVEAKVIYTG KSSMHIALEV NACDPKSLNR RLTTHCIVIM VAVDAHSHPI
YVPAWVPESE EDIQQNETAR KLMEMRKKIG EEMQIFVE
|
|---|
| |