Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_2763 |
Symbol | |
ID | 4623779 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 3391392 |
End bp | 3392657 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 639797883 |
Product | MscS mechanosensitive ion channel |
Protein accession | YP_944069 |
Protein GI | 119946389 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0668] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTAATA CCGTTATTAA TAAGTATCAA ACAATTTTTT CAGATCAAGC ATTAGCAATA GATATTTCAG TTATCTCAAT GCTGTTAATG CTTATCTTAA TCTCGATGAT CGCAAATTAT ATTACCAAAA AAATAATAAC TGTTTTTGTT AAAAAATTTA TTGATAAGAC GAGAAGTCAA TGGGATAACA TCTTTTACGA CTGTCATGTA TTCACCCGTT TATCCCACTT GATACCAATA TTGTTCTTTA GTGTCGGTTC AACAATCATT TTTCCAGCAG ATGCTTACCC GCTTTTATTG GATAATCTTT CTAAATTTAC TTCGCTGTAT TTGATTCTTG CCTTTGCCCT TGTCATTCAT AGCCTACTGG CGGCATTTGA TGCTATTTAC CGTACCTACA AAATGTCAAA GCAACGGCCA ATCAACAATT ATGTTCAAGT TCTAAAGATT ATTCTGTGGA TTTTTACCAC GGTTGCCTCC ATCTCACTTC TGCTCAGCAA GGATCTTTGG GCATTATTTT TAGGTATGAG CGGCATGATG GCGATCATTA TGCTGGTCTT TAAAGACACT CTCCTTGGAC TTGTGGCCGG TATGCAGATT ACTGCTAATG ATATGTTACG TCTTGATGAT TGGTTGGAAA TGCCAAGTCG TAATGCGGAT GGTGATGTGA TTGATATAAC CCTTAATACG GTTAAGGTCA GAAACTGGGA TAAAACGATC ACGACTATTC CTACCCATGC TTTGATGTCG GAGTCGTTCA AAAATTGGCG GGGAATGACC GAGTCGGGAG GGCGGAGAAT CAAGCGTTCT ATCTCAATTG ATATGACATC GGTAAAATTT TGCGATCAAG AAATGCTTCA GTCTTTTATG AAAATTGAGA TTCTTAAGGA TTATTTACTT AAGAAACAAA AAGAAATAGA GACTTACAAT AAAGAAACAG GAAACGATTT AAGTAACCCT GCTAATGGCA GGCGGCTCAC TAATATAGGT ACCTTTAGGG CATATCTATC CGCTTATTTG AAAAAAAATC CTAAAATACA TCAAGAGTTG ACTTTTATGG TGAGGCAGTT GTCACCAAGT TCTACGGGCG TACCTATTGA AGTTTATGTT TTTAGTAACG ATCAGGATTG GGTTAATTAT GAGGGAATTC AAGCGGACAT TTTTGACCAT ATTTTAGCCG TTATTCCTGA GTTTGGCCTG AGAGTTTTTC AGGATCCTAC TGGTTCTAAT TTTGAAAAAG CCTTCAGTCG ATCCGCTAAT AATTAA
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Protein sequence | MINTVINKYQ TIFSDQALAI DISVISMLLM LILISMIANY ITKKIITVFV KKFIDKTRSQ WDNIFYDCHV FTRLSHLIPI LFFSVGSTII FPADAYPLLL DNLSKFTSLY LILAFALVIH SLLAAFDAIY RTYKMSKQRP INNYVQVLKI ILWIFTTVAS ISLLLSKDLW ALFLGMSGMM AIIMLVFKDT LLGLVAGMQI TANDMLRLDD WLEMPSRNAD GDVIDITLNT VKVRNWDKTI TTIPTHALMS ESFKNWRGMT ESGGRRIKRS ISIDMTSVKF CDQEMLQSFM KIEILKDYLL KKQKEIETYN KETGNDLSNP ANGRRLTNIG TFRAYLSAYL KKNPKIHQEL TFMVRQLSPS STGVPIEVYV FSNDQDWVNY EGIQADIFDH ILAVIPEFGL RVFQDPTGSN FEKAFSRSAN N
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