Gene Ping_2763 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2763 
Symbol 
ID4623779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3391392 
End bp3392657 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content37% 
IMG OID639797883 
ProductMscS mechanosensitive ion channel 
Protein accessionYP_944069 
Protein GI119946389 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0668] Small-conductance mechanosensitive channel 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAATA CCGTTATTAA TAAGTATCAA ACAATTTTTT CAGATCAAGC ATTAGCAATA 
GATATTTCAG TTATCTCAAT GCTGTTAATG CTTATCTTAA TCTCGATGAT CGCAAATTAT
ATTACCAAAA AAATAATAAC TGTTTTTGTT AAAAAATTTA TTGATAAGAC GAGAAGTCAA
TGGGATAACA TCTTTTACGA CTGTCATGTA TTCACCCGTT TATCCCACTT GATACCAATA
TTGTTCTTTA GTGTCGGTTC AACAATCATT TTTCCAGCAG ATGCTTACCC GCTTTTATTG
GATAATCTTT CTAAATTTAC TTCGCTGTAT TTGATTCTTG CCTTTGCCCT TGTCATTCAT
AGCCTACTGG CGGCATTTGA TGCTATTTAC CGTACCTACA AAATGTCAAA GCAACGGCCA
ATCAACAATT ATGTTCAAGT TCTAAAGATT ATTCTGTGGA TTTTTACCAC GGTTGCCTCC
ATCTCACTTC TGCTCAGCAA GGATCTTTGG GCATTATTTT TAGGTATGAG CGGCATGATG
GCGATCATTA TGCTGGTCTT TAAAGACACT CTCCTTGGAC TTGTGGCCGG TATGCAGATT
ACTGCTAATG ATATGTTACG TCTTGATGAT TGGTTGGAAA TGCCAAGTCG TAATGCGGAT
GGTGATGTGA TTGATATAAC CCTTAATACG GTTAAGGTCA GAAACTGGGA TAAAACGATC
ACGACTATTC CTACCCATGC TTTGATGTCG GAGTCGTTCA AAAATTGGCG GGGAATGACC
GAGTCGGGAG GGCGGAGAAT CAAGCGTTCT ATCTCAATTG ATATGACATC GGTAAAATTT
TGCGATCAAG AAATGCTTCA GTCTTTTATG AAAATTGAGA TTCTTAAGGA TTATTTACTT
AAGAAACAAA AAGAAATAGA GACTTACAAT AAAGAAACAG GAAACGATTT AAGTAACCCT
GCTAATGGCA GGCGGCTCAC TAATATAGGT ACCTTTAGGG CATATCTATC CGCTTATTTG
AAAAAAAATC CTAAAATACA TCAAGAGTTG ACTTTTATGG TGAGGCAGTT GTCACCAAGT
TCTACGGGCG TACCTATTGA AGTTTATGTT TTTAGTAACG ATCAGGATTG GGTTAATTAT
GAGGGAATTC AAGCGGACAT TTTTGACCAT ATTTTAGCCG TTATTCCTGA GTTTGGCCTG
AGAGTTTTTC AGGATCCTAC TGGTTCTAAT TTTGAAAAAG CCTTCAGTCG ATCCGCTAAT
AATTAA
 
Protein sequence
MINTVINKYQ TIFSDQALAI DISVISMLLM LILISMIANY ITKKIITVFV KKFIDKTRSQ 
WDNIFYDCHV FTRLSHLIPI LFFSVGSTII FPADAYPLLL DNLSKFTSLY LILAFALVIH
SLLAAFDAIY RTYKMSKQRP INNYVQVLKI ILWIFTTVAS ISLLLSKDLW ALFLGMSGMM
AIIMLVFKDT LLGLVAGMQI TANDMLRLDD WLEMPSRNAD GDVIDITLNT VKVRNWDKTI
TTIPTHALMS ESFKNWRGMT ESGGRRIKRS ISIDMTSVKF CDQEMLQSFM KIEILKDYLL
KKQKEIETYN KETGNDLSNP ANGRRLTNIG TFRAYLSAYL KKNPKIHQEL TFMVRQLSPS
STGVPIEVYV FSNDQDWVNY EGIQADIFDH ILAVIPEFGL RVFQDPTGSN FEKAFSRSAN
N