Gene Ping_2755 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2755 
Symbol 
ID4623771 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3380283 
End bp3381227 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content41% 
IMG OID639797875 
Productsiroheme synthase 
Protein accessionYP_944061 
Protein GI119946381 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1648] Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) 
TIGRFAM ID[TIGR01470] siroheme synthase, N-terminal domain 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.600217 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGACT ATTTCCCGAT TTTTTTAGAT GCTAAAAAGT TTAATGCCGT GGTTATTGGA 
GGCGGTAATG TTGCTGCGCG AAAGATTGAA CTTTTGCTCA AGTCAAAAGT GCAGATTACC
GTTGTCAGCC CGGCACTTAA AGAGAGTGTA AAAGGACTGT TAGCAAACCA GCAACTCACT
TGGATTGAAG CTGAATATGC GCCTCATTTT CTGGACAACC ATCAGTTAGT GATAGCAGCA
ACAAATATCA GATCGGTCAA CATTACAATC AGTATTGCGG CGAATCATCG CGGTATGCTG
CTCAATGTGG TTGACGATCC TGATCTTTGC AATTACATCA CACCCGCAAT TATTGACAGG
GATCCGATGA TTATTGCTAT GTCAAGCTCA GGTAATGCCC CTATATTATT ACAAATGTTA
AAATCTCAAA TAGAACAGAT GTTACCCGCA GGTTATGGCA GATTAGCGCG CTTTTGTGGC
CGCTACCGTA TTGAAGTACA GGCCAGAATC AAACAGTTTT CCGAACGTAA ACTGTTCTGG
AAAAAAATAT TGACGGGTGA TGTCGCCAAA CAGTTACTGG CGGGTGATGA AGAACAAGCT
GTACAGCTGT TTAATCAGGC GCTGACCACT GACAAATTTA AAGAAAGCGG CAGTATAAGT
GTTATCAGAA TTTATGATCA GCAACCTGAT AATTTAACCC TGCAGGCGTA TCAAAAAATG
CAGCAGGCCG ATGCAATATT TTTAGACTCT GATATTACAG CGTTATTTTT TGATTATGGG
CGGCGCGATG CAGCTAAATT CCAAAAAATT GATAAACATA GTATTGAAAA ATTGGCCGAT
AATAACCAAC AAGTTGTTAT TATCGCGGCA CATTCTGCTC AATTAGTGTC AGCGTTTAAT
ACTGACTCTC CCGTCTCAGA AATTATTTGC GGACGTGTTA TTTAA
 
Protein sequence
MMDYFPIFLD AKKFNAVVIG GGNVAARKIE LLLKSKVQIT VVSPALKESV KGLLANQQLT 
WIEAEYAPHF LDNHQLVIAA TNIRSVNITI SIAANHRGML LNVVDDPDLC NYITPAIIDR
DPMIIAMSSS GNAPILLQML KSQIEQMLPA GYGRLARFCG RYRIEVQARI KQFSERKLFW
KKILTGDVAK QLLAGDEEQA VQLFNQALTT DKFKESGSIS VIRIYDQQPD NLTLQAYQKM
QQADAIFLDS DITALFFDYG RRDAAKFQKI DKHSIEKLAD NNQQVVIIAA HSAQLVSAFN
TDSPVSEIIC GRVI