Gene Ping_2750 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2750 
SymbolgarR 
ID4626011 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3373800 
End bp3374675 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content49% 
IMG OID639797870 
Product2-hydroxy-3-oxopropionate reductase GarR 
Protein accessionYP_944056 
Protein GI119946376 
COG category[I] Lipid transport and metabolism 
COG ID[COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGTTG CATTTATCGG CTTAGGCGTT ATGGGTTACC CGATGGCAGG ATTTTTAAAG 
CAGGCGGGTC ATGATGTTTG TGTCTATAAC CGCACATTAG CCAAGGCACA GAAGTGGCAG
CAACAATATC AGGGCAGCAT AGGCCTGACT CCACGTGAAG CCGCTCAAGA CGCTGAAATT
GTGTTTAGCT GTGTTGGCAA TGACAATGAT TTACGCGCGG TTGTTTTGGG TGAAGATGGC
ATGCTGGCAG GAATGAAGAG CGGCGCTATA TTAGTTGATC ATACAACGGC ATCTGCCGAT
GTTGCTCGTG AACTGGCAGC GCTCTGTGCT GAGCAAGGCA AAGGATTTCT CGACGCACCG
GTATCCGGTG GTCAGGCGGG CGCAGAAAAG GGTATTTTAA CCATTATGAT TGGCGGTGAC
AGCGCGGTAT TTGAGAAAGT GTGTCCGGTT ATTGATGCCT ATGCTCGCTG TGCTGAACGG
ATTGGTGATG TGGGCAGTGG TCAGCTGGCT AAAATGGTTA ACCAGATCTG TATTGCCGGC
GCGGTGCAAG GCTTGGCTGA GGCGATTCAT TTTGCCAAAT GTGCCGATCT TGATGTCAAT
AAAGTCATTG ATGTGATCTC CAAAGGCGCG GCGCAGTCGT GGCAAATGGA GAATCGTCAT
CAGGCAATGA TCGACAATAG TTATGAATTT GGTTTTGCGG TTGACTGGAT GCGCAAAGAT
TTAGCGATTA CGCTTAATGA AGCACGCCAC AATAAGGCAA ACTTACCAGT GACAGCAGTA
GTCGATCAGT TTTATGGTGA AGTGCAAGGC ATGGGGGGAA GTCGCTGGGA CACCGCAAGC
TTACATGCCC GGTTAGAAAA ATTTACCGAT AAATAA
 
Protein sequence
MKVAFIGLGV MGYPMAGFLK QAGHDVCVYN RTLAKAQKWQ QQYQGSIGLT PREAAQDAEI 
VFSCVGNDND LRAVVLGEDG MLAGMKSGAI LVDHTTASAD VARELAALCA EQGKGFLDAP
VSGGQAGAEK GILTIMIGGD SAVFEKVCPV IDAYARCAER IGDVGSGQLA KMVNQICIAG
AVQGLAEAIH FAKCADLDVN KVIDVISKGA AQSWQMENRH QAMIDNSYEF GFAVDWMRKD
LAITLNEARH NKANLPVTAV VDQFYGEVQG MGGSRWDTAS LHARLEKFTD K