Gene Ping_2745 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2745 
Symbol 
ID4626006 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3367737 
End bp3368840 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content41% 
IMG OID639797865 
ProductABC transporter ATP-binding protein 
Protein accessionYP_944051 
Protein GI119946371 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID[TIGR03265] putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.870827 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAACAT ATCTTAATAT CGACAATGTA GTCAAAAAAT TTGGCCAATT TACTGCACTG 
GAGAAAATAT CTTTTAGCAT TAAAGAAGGC GAATTTGTGT GTTTTTTAGG CCCGTCAGGT
TGTGGAAAAA CCACACTGCT GCGCTGTATT GCGGGGTTAG AAGCGGTGAC TTCCGGCCTT
ATGGTTCAAG CGGGTACTGA TATTACCCAT TTGCCGCCGG AAAAAAGAGA TTTTGGCATC
GTTTTTCAAT CCTATGCGCT TTTTCCTAAT TTAACGGTGC AGGATAATAT TGCACTGGGT
TTAAAGAATC AGGGTCACTC TAATTATGAC TGCATTAATC TAGTTAATAA ATGGCTTGCA
ATGGTAGGAC TGACTGACTT TGCAAATCAA TACCCTAACC AGCTGTCGGG TGGACAACAA
CAACGTGTCG CATTAGCGCG TGCATTGGCA TTATCACCGG GATTATTATT ATTAGATGAA
CCACTGTCAG CCTTAGATGC AAAGGTGCGT ACTTATTTAC GTGAAGAAAT CTGCCGGTTA
CAAAAAAAAT TAGGCATCAC CTCGGTAATG GTCACACATG ATCAGGAAGA AGCATTAGCG
ATGGCGGATC GTATTGTCGT AATGAACCAG GGCGTGATTG AGCAAATTGG GTCTCCACAG
GAAATTTATG AACAACCTGC AACACGTTTT GTTGCGAACT TTGTCGGCAC CATGAACTTT
ATTTCAGCTT CAATTATTAA TAAATCGTTT ATCAGAATCG GAGAGAGTCT ATTAAAGATC
CCGGAAAACA CCCCGATTAA GGGTATTAAG AGCGGTCTGG TGGATCTTGC TATTCGCCCG
GAATGTTTAT ATTTTTGCTC TGAGAGTGAA AACAGTATTT CAGTTAAAAT TCAATTTATC
GAATTTCAGG GCGCTTATTA TCAGGTGGAA TGCCAATTGT GGGATGAATT ATCGGCACCG
AGCATTTACG TTAACGTACC CGTACGAGAA GCCAGAAAAC TAAATTTAAA ATCACAACAA
ACACGCAATC TAGCCATAGA TACGACCCAA ATACGCACTT ATTCACCAAC CTATAAAAGC
AAGCCTACCG TTGTCGCCGC TTAG
 
Protein sequence
MQTYLNIDNV VKKFGQFTAL EKISFSIKEG EFVCFLGPSG CGKTTLLRCI AGLEAVTSGL 
MVQAGTDITH LPPEKRDFGI VFQSYALFPN LTVQDNIALG LKNQGHSNYD CINLVNKWLA
MVGLTDFANQ YPNQLSGGQQ QRVALARALA LSPGLLLLDE PLSALDAKVR TYLREEICRL
QKKLGITSVM VTHDQEEALA MADRIVVMNQ GVIEQIGSPQ EIYEQPATRF VANFVGTMNF
ISASIINKSF IRIGESLLKI PENTPIKGIK SGLVDLAIRP ECLYFCSESE NSISVKIQFI
EFQGAYYQVE CQLWDELSAP SIYVNVPVRE ARKLNLKSQQ TRNLAIDTTQ IRTYSPTYKS
KPTVVAA