| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_2730 |
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| Symbol | |
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| ID | 4626392 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | - |
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| Start bp | 3350274 |
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| End bp | 3352049 |
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| Gene Length | 1776 bp |
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| Protein Length | 591 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 639797853 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_944039 |
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| Protein GI | 119946359 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0590236 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAAGG ACGCAGAATA CGACAGTAAA ATTAATGACA GGAAAGGCTA TTTGTCAGAG
CTTGCTATTG CCAACAATAA GCTGGCCGTT GCCAACAGTG CGCTGGCGAT TGCCAACAAG
AAGCTTACCA TTGCCAACAA GAAGCTTACC ATTGCCAACA AGAAGCTTAC CATTGCCAAC
AAGGAGCTTG CCATTGTCAA CGAGGAGCTT GCCATTGCCA ACAAGGAGCT TGCCTTTCAA
AACGAAGAGA AGGATAAACG GGCAGCGGAG CTTGCTATTG CCAACCAGGA GCTTACCTTT
CAAAACAAAG AGAAAGCTAA ACGGGCAGTG GAGCTTGCTA TTGCCAATAA AGAACTTGCC
TTTCAAAGCA AAGAGAAAGC TAAACGGGCA GCGGAGCTTG CTATTGTCAA CCAGGATCTT
ACCTTTCAAA GCAAAGAGAA AGCTAAACTG GCAGAAGAGC TTAATGACCT TGCCTTCTAT
GACACGCTTA CCGGCTTGCC CAACAGGCGT CTTTTGATAG ACCGGCTGCA TCACGCATTA
GCTTCCAACG TGCGTCAAGG CTGTGAAAGT GCGGTGATGT TTATTGATTT GGATCATTTC
AAGGATATCA ACGACACCCT CGGCCATGAA GTCGGTGATT TACTGCTGAT ACAGACAGCG
CAACGCCTGG AATCCTGTCT ACGCAAAGGC GATACCGTGG CGCGTCTGGG AGGGGATGAG
TTTATGTTGA TTCTGGAAAA CCTGGACGAA AATCCCATTG AAGCCGCAAC AAAGGCGAAG
GCTATTGCTG ATAAAATTTT AGCTGAGCTC AACAAACCTT ACCAACTCGA CATGCACAAA
TGTCACAGCA CCGTAAGTAT CGGTGCGGTC TTTTTCGACC ATCAGGGTAA TACGGCAGAA
GATCTGATCA AACAAGCCGA TATCGCCATG TATCAGGCCA AACAAGCAGG TGGCAATCTG
ATCAGGTTCT TTAACCCGAA AATGCAGGAG AGTATTAACG CGCGCATCAC CCTCGAAAAT
GAATTGCGCA TTGCCATTGA AAAGTCGCAA TTTCATTTGT ATTACCAAAT TCAGATGGAC
AGTGACAACC GGGTATTGGG AGCCGAAGCA TTGATCCGCT GGACGAACCC TGAACACGGG
CTAGTGTTAC CTGCTACCTT TATCCCTATA GCGGAAGAAA CCGGATTGAT TCTGTCCATT
GGGAAATGGG TTATCGAAAC GGCTTGTGCG CAGATCAAAG TATGGCAGAA AAAGTCGCAG
ACGCGCGACT TAACACTGGC AGTCAATGTG AGTGCAAAAC AATTCCGGCA GAAGGATTTC
GTGGATCAAG TCCAGTCAGC TGTACAACGA CATGCTATTC CCGGAAATTT ACTCAAGCTG
GAATTGACCG AAAGCCTGCT GCAATATGAC ACCGAAGTCA CCATTGCCAT GATGAAGGCA
TTAAATAAGA TTGGCGTGCA GTTCTCTCTG GATGACTTTG GAACAGGTTA TTCATCCTTA
CAGTACCTTA AGCGGCTGCC CCTCGATCAG TTCAAAATCG ACCAGTCCTT TGTGCGCGAT
ATTGCGACAG ATAATAACGA TAAAGCGATA GTCAAAGCGA TTATTGCTAT GGCACAGATT
CTGGATATAG ACGTCATTGC CGAGGGAGTG GAAACTGAAG AGCAACAACA ATTACTCTTA
GGAAAAGGTT GCACTCTTTA CCAAGGATAT TTATTCAGCA AACCAATACC TATTGATCAG
TTTGATGCAT TAATCGGTCG TTTTACTGAC AGCTAA
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| Protein sequence | MSKDAEYDSK INDRKGYLSE LAIANNKLAV ANSALAIANK KLTIANKKLT IANKKLTIAN
KELAIVNEEL AIANKELAFQ NEEKDKRAAE LAIANQELTF QNKEKAKRAV ELAIANKELA
FQSKEKAKRA AELAIVNQDL TFQSKEKAKL AEELNDLAFY DTLTGLPNRR LLIDRLHHAL
ASNVRQGCES AVMFIDLDHF KDINDTLGHE VGDLLLIQTA QRLESCLRKG DTVARLGGDE
FMLILENLDE NPIEAATKAK AIADKILAEL NKPYQLDMHK CHSTVSIGAV FFDHQGNTAE
DLIKQADIAM YQAKQAGGNL IRFFNPKMQE SINARITLEN ELRIAIEKSQ FHLYYQIQMD
SDNRVLGAEA LIRWTNPEHG LVLPATFIPI AEETGLILSI GKWVIETACA QIKVWQKKSQ
TRDLTLAVNV SAKQFRQKDF VDQVQSAVQR HAIPGNLLKL ELTESLLQYD TEVTIAMMKA
LNKIGVQFSL DDFGTGYSSL QYLKRLPLDQ FKIDQSFVRD IATDNNDKAI VKAIIAMAQI
LDIDVIAEGV ETEEQQQLLL GKGCTLYQGY LFSKPIPIDQ FDALIGRFTD S
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