Gene Ping_2726 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2726 
Symbol 
ID4626388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3344128 
End bp3345258 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content47% 
IMG OID639797849 
Productglycine cleavage system T protein 
Protein accessionYP_944035 
Protein GI119946355 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0404] Glycine cleavage system T protein (aminomethyltransferase) 
TIGRFAM ID[TIGR00528] glycine cleavage system T protein 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.129857 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGATT CACTGTCCGA AGAACTTTTG GTTACCCCGC TGCACGCACT GCACATTGAA 
ATGGGGGGTA AAATGGTCCC TTTTGCGGGT TATGATATGC CCGTGCAATA TTCACTGGGA
GTGCGTAAGG AACATCTGCA TTGCCGTGAT GCTGCTGGCT TATTTGATGT TTCACATATG
GGGCAGGTGC GTCTTTTTGG TGAAAATGCA GCGGAGGGAT TAGAGGCCTT AGTCCCCGTT
GATATTATGG ATTTACCCGT GGGCAAACAA CGTTATGCTT TCTTCACTAA TGAGCAGGGC
GGCATTAATG ATGATTTAAT GGTGGGTAAC CTTGGCGATT TTTTATTGGT TGTGGTCAAT
GCGGCGTGTA AACAACAAGA TATTGCGCAT CTGCGGGCTA ATCTTCCCAG TGATGTCAGG
TTAGAAGTGA TCGAAGATCG TGCTTTACTG GCATTACAAG GTCCGCAAGC GGTAGAGGTT
CTGGCGAAGA TTAATCCGGC GGTCAACAAT ATGCGCTTTA TGGATGCTAT GAAAATACAG
CTGGCGGGTG TCGAATGTTA TGTTAGCCGC TCCGGTTATA CGGGTGAAGA CGGCTTTGAA
ATTTCTGTCC CTGCCGCACA AGCTGAGGCT CTGGCACGTG AACTGCTGGC TTTTGCTGAA
GTTGAGTGGA TTGGTCTTGG CGCACGAGAC TCATTACGTC TGGAAGCGGG TTTATGTTTA
TATGGCCATG ATCTTGATGA AACCACAACA CCGGTCGAAG CAAGTTTATT ATGGGGTATT
AGCAAAGCTC GTCGTGCAGA GGGTAGTCGT CCAGGTGGTT TTCCGGGTGC TGACATTATT
CTTGAACAGA TCAAAAGCAA AAATATTACC CGTAAGCGTG TCGGTTTATT GGGCACATCA
AAAGCGCCGG TGCGTGAAGG TTGTGAATTG TTTGATGCGG CTGATAATAA AATTGGTATT
GTTACCAGCG GTACCTTCGG CCCTTCAAAA GGGATGCCTG TTGCAATGGC CTATGTTGAT
GTGAATTGCA GCCAAATCGG GTCGGAAGTC TTTGCTGAAG TGCGTGCTAA AAAACTGCCC
ATGACAGTAG TAAAAATGCC TTTTGTTGAA GCGAATTACT TTAGAGGTTA A
 
Protein sequence
MSDSLSEELL VTPLHALHIE MGGKMVPFAG YDMPVQYSLG VRKEHLHCRD AAGLFDVSHM 
GQVRLFGENA AEGLEALVPV DIMDLPVGKQ RYAFFTNEQG GINDDLMVGN LGDFLLVVVN
AACKQQDIAH LRANLPSDVR LEVIEDRALL ALQGPQAVEV LAKINPAVNN MRFMDAMKIQ
LAGVECYVSR SGYTGEDGFE ISVPAAQAEA LARELLAFAE VEWIGLGARD SLRLEAGLCL
YGHDLDETTT PVEASLLWGI SKARRAEGSR PGGFPGADII LEQIKSKNIT RKRVGLLGTS
KAPVREGCEL FDAADNKIGI VTSGTFGPSK GMPVAMAYVD VNCSQIGSEV FAEVRAKKLP
MTVVKMPFVE ANYFRG