Gene Ping_2711 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2711 
Symbol 
ID4625890 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3326863 
End bp3327990 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content42% 
IMG OID639797834 
Productcytochrome oxidase assembly 
Protein accessionYP_944020 
Protein GI119946340 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1612] Uncharacterized protein required for cytochrome oxidase assembly 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.318505 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.197549 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAAAA CAGGTGTAAA TATCATCAAT AATCGCTATA AAACATTAGT CCTATTGAGT 
TGTCTATTAT CTGTTTTAGT GGTCGGTTTA GGCGCTTATA CGCGCTTAAG CGATGCCGGT
TTAGGTTGCC CGGATTGGCC CGGGTGTTAT GGCTCTTTAA CTGTACCGGC AGAGTTAGAT
GCAAGCGCTA CAGCAAAACA CAGTCAACCG GGCACTATGG ATTTAGTCTT TGAATCCGCA
AAAGCCTGGA AAGAGATGAT TCACCGATAC TTTGCCGGAA CGCTCGGTTT AATGCTTTTG
GCTATTTTAT TATGGCCACT GTTTAACAAT CTAAAAGTCT TAAGACATCA ATCATCAATC
AATAAAAAAA AGCACTCGCC GAATGTTTTA ATGCCGTTTA AATTACCTGC ACTGCTGGTT
TTATTGGTGC TATTTCAGGC CTTCCTAGGC ATGTTAACCG TGACTATGCA GCTCCAGCCT
CTGATTGTAA TGGGGCATCT GCTCGGTGGT TTTGCCATCT TGAGTTTATC AACTCTATTC
TACCTGCGCC TTATCAGTAA CCCCTCAGAC ACTAATGATT TCGCTGTTCA GCACGCTTAT
CTATGGTGTC TAAGTGCATT GTTTGTCCTG CTGATACAAA TCGCTTTGGG AGGGTGGTTG
GCGGCTAATT ATGCTGCGCC CTATTGTGCT GGTTTGCCAT TATGCAGTGG CGGATGGAAC
GCAGGTGACT GGCAGCAAAA TTTTTCAATT TTAGACATTT TCCAGTTACC TGCGACGTCC
AATAACTATG AATATGGGGT GTTATCGCCG CAGGCGCGCA TGTCTATCCA TTTAGCACAC
CGATTCTGGG CAATTATCAC TGCCATTACT ATTTTGGTTG TGGCAATAAA AGTTTATTGG
TTAAGCCAAT CTAATAAAGT GAAAAACAGT GCGCTGCTTG TGATCTTGAT GGTTATCTGC
CAGGTTTCAT TGGGTGTTTT TTTAGTTTAT TGGGCTTTTC CGATAAGCAT CGCATTGGCT
CATAATTTAA TGGCGGCAAT GTTACTGCTG AGTTTAATAA GATTAACCTA TTACGTGAAA
TTATTAGCAT TGCCGCATAA GTCGATTGCC GGTTTTAATA CTTTTTAA
 
Protein sequence
MQKTGVNIIN NRYKTLVLLS CLLSVLVVGL GAYTRLSDAG LGCPDWPGCY GSLTVPAELD 
ASATAKHSQP GTMDLVFESA KAWKEMIHRY FAGTLGLMLL AILLWPLFNN LKVLRHQSSI
NKKKHSPNVL MPFKLPALLV LLVLFQAFLG MLTVTMQLQP LIVMGHLLGG FAILSLSTLF
YLRLISNPSD TNDFAVQHAY LWCLSALFVL LIQIALGGWL AANYAAPYCA GLPLCSGGWN
AGDWQQNFSI LDIFQLPATS NNYEYGVLSP QARMSIHLAH RFWAIITAIT ILVVAIKVYW
LSQSNKVKNS ALLVILMVIC QVSLGVFLVY WAFPISIALA HNLMAAMLLL SLIRLTYYVK
LLALPHKSIA GFNTF