| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_2704 |
|---|
| Symbol | |
|---|
| ID | 4625883 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | + |
|---|
| Start bp | 3317310 |
|---|
| End bp | 3319232 |
|---|
| Gene Length | 1923 bp |
|---|
| Protein Length | 640 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 639797827 |
|---|
| Product | putative serine protein kinase, PrkA |
|---|
| Protein accession | YP_944013 |
|---|
| Protein GI | 119946333 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2766] Putative Ser protein kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.860525 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCTTT TAGAGCACTA TCGTCAACGT TACGACAATG TCAAAGAAGA AGAAATGTCC
ATTCAGGAAT ATCTGGCGCT ATGTAAGAAG GATCCCGGTG CCTATGCCTC TGCAGCAGAA
AGAATGTTAC TGGCGATTGG TGAGCCTGAA CTGATCGATA CTTCTCGCGA TCCCCGTTTA
AGTCGCATTT TTTCCAATAA AGTAATCAAA CGCTATGCCA CATTTGATGA TTTTTACGGT
ATGGAAGAGT GCATTGAAAA TATTGTTTCC TATTTTAAAC ATGCAGCTCA GGGCTTGGAA
GAAAGAAAAC AAATTATTTA TTTGCTTGGC CCCGTTGGCG GCGGTAAATC ATCATTAGCA
GAAAAACTCA AATCACTGAT GGAAAAACAG CCTATCTACT GCATTAAAGG CTCTCCAGTA
TTTGAATCAC CACTGGGTTT GTTTGATCCG GAAGAAGATG GACAAATACT CAGCGAAGAT
TACGGCATCC CAAAACGTTA TATCAGCACC ATAATGTCGC CCTGGGCAGG TAAACGGTTA
CAGGAATATA ATGGTGATAT CAGTAAATTT CGGGTGGTTA AGCTCTTCCC TTCTATTCTT
AATCAAATAG CGATTTCAAA AACCGAGCCG GGTGATGAAA ATAATCAGGA TATTTCATCT
CTGGTCGGTA AGGTTGATAT TCGCCAACTT GAAGATTTTT CGCAAAATGA TCCCGATGCT
TACAGTTTCT CGGGCGCTTT ATGCCGTTCA AACCAAGGTT TGATGGAATT TGTGGAGATG
TTTAAAGCCC CGATCAAGGT GCTTCACCCG TTATTAACCG CCACACAAGA GAGCAATTAT
AATAGTACCG AGGGCTTAAG TGCCATTCCC TTTGACGGTA TTATTCTTGC CCATTCTAAT
GAATCAGAAT GGCAAACCTT CAAAAATAAT AAAAATAATG AGGCGTTTAT TGATCGCGTC
TATATTGTAA AAATCCCCTA CTGCCTGCGC GTATCTGAAG AAATTAAAAT TTATGAAAAA
TTATTAGAAA ACAGTTCGTT GTATGCTGCA CATTGCGCCC CGGATACGCT TAGCATGCTG
GCCAAGTTTG TTATTTTGTC ACGCCTGAAA GAGCCTGAAA ATTCCAGTAC CTATTCAAAA
ATGAAGGTCT ATGACGGTGA GAACTTAAAG GATACGGATC CTAAAGCTAA ATCGATGCAG
GAATACAAAG ATACAGCGGG TGTTGATGAA GCGATGGATG GTTTATCAAC CCGCTTTGCT
TTTAAAATAC TCTCTAAAGT ATTTAATTTT GATCCCACTG AAATTGCTGC TAATCCGGTA
CATTTATTGT ATGTATTAGA ACAGCAGATT GAACAACAAC AGTTTAAAAA AGAGTTACAG
GAAAAATATT TAGGGTTTAT TAAAGAATTT ATTGCCCCGC GCTATATAGA CTTTATCGGC
AAAGAGATTC AAACCGCCTA TTTAGAATCC TATGCGGAAT ACGGTCAAAA CATATTCGAT
CGTTATGTCA CCTATGCTGA TTTTTGGATT CAAGATCAAG ATTTTAGGGC ACCAGAAACC
GGGGAGATAT TGGATCGAAA CTCCCTTAAT GAAGAGCTCG AAAAAATAGA AAAACCGGCG
GGGATAAGTA ATCCAAAAGA TTTTCGTAAT GAAGTGGTTA ATTTTGTGCT GCGCGCACGC
GCAAATAACG AGGGTAAAAA TCCAAATTGG AATAGTTACC AGAAACTACG TACCGTTATT
GAGAAAAAAA TGTTCTCCAA TACAGAAGAT TTATTGCCGG TTATTTCATT TAATGCAAAA
GCGTCGGCAG ATGACCAGCA TAAACACAAA GAATTTGTCG ATCGGATGAA GGACCGGGGT
TATACCGAAA AGCAGGTTCG CTTACTGTCC GAGTGGTATT TACGGGTTAG AAAATCACAA
TGA
|
|---|
| Protein sequence | MNLLEHYRQR YDNVKEEEMS IQEYLALCKK DPGAYASAAE RMLLAIGEPE LIDTSRDPRL
SRIFSNKVIK RYATFDDFYG MEECIENIVS YFKHAAQGLE ERKQIIYLLG PVGGGKSSLA
EKLKSLMEKQ PIYCIKGSPV FESPLGLFDP EEDGQILSED YGIPKRYIST IMSPWAGKRL
QEYNGDISKF RVVKLFPSIL NQIAISKTEP GDENNQDISS LVGKVDIRQL EDFSQNDPDA
YSFSGALCRS NQGLMEFVEM FKAPIKVLHP LLTATQESNY NSTEGLSAIP FDGIILAHSN
ESEWQTFKNN KNNEAFIDRV YIVKIPYCLR VSEEIKIYEK LLENSSLYAA HCAPDTLSML
AKFVILSRLK EPENSSTYSK MKVYDGENLK DTDPKAKSMQ EYKDTAGVDE AMDGLSTRFA
FKILSKVFNF DPTEIAANPV HLLYVLEQQI EQQQFKKELQ EKYLGFIKEF IAPRYIDFIG
KEIQTAYLES YAEYGQNIFD RYVTYADFWI QDQDFRAPET GEILDRNSLN EELEKIEKPA
GISNPKDFRN EVVNFVLRAR ANNEGKNPNW NSYQKLRTVI EKKMFSNTED LLPVISFNAK
ASADDQHKHK EFVDRMKDRG YTEKQVRLLS EWYLRVRKSQ
|
|---|
| |