| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_2697 |
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| Symbol | |
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| ID | 4625409 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | + |
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| Start bp | 3308884 |
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| End bp | 3309807 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 639797820 |
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| Product | histone deacetylase superfamily protein |
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| Protein accession | YP_944006 |
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| Protein GI | 119946326 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.458585 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.350304 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTGTTG GTATTATTAG TCATCACCGT TGTAGTCGCC ATAATATGGG GGATCACCAC
CCGGAAAGCC CTCAAAGGAT GGGGGCAATA CAAGATCAGT TAATTAGAAG TGGCCTTGAA
TACGTTATTC ACCAATATGA TGCAACACCG ATTGCCCGTG AAATTATTGA ACTTGCTCAT
GACAAGAAAT ATATAGACTA CATTTTCGAC AATGCCCCAA AAGAAGGGAT GTTTCGCGTT
GATGATGATA CATCAATGAA CCCTGAATCG CTCCCCGCAG CTTTACTTTC TGCCGGAGCC
GCAATTAATG CTGTTGATTT AGTGATGGAT AAAACACTTA GCGCCGTATT TTGTGCCACT
CGCCCCCCCG GGCATCATGC AGAATATGAT AAAGGAATGG GATTTTGTTT CTTCAATAAT
ATTGCAATTG CTGCCGCATA CGCCAAAAAA AAGTATCAAC TAGAACGAGT GGCCATTCTA
GACTTTGATG TGCATCACGG TAATGGCACA GAAAATATCG TTAAAAATAA AACTGGTTAT
TTATTTTGCT CAACCTACCA ATACCCATTT TTCCCTTTTG AAATGCAGGA GAGTAATACC
CCTCCCATCA TTAACACCCC ATTGCCAGCA ACCACAAAAG GTCCTGAATT TCGTCAAGCC
ATTACTGAAA ACTGGTTACC TGCCTTGCAT AAATTTAAAC CACAATTAAT TTTAATTTCA
GCAGGCTTTG ATGCTCATAT AGAAGATGAA ATGTCGCAAA TAAGTTTAAC TGAAAGCGAT
TATCGTTGGG TAACTGACGA AATAAAGATT ATTGCCGATC AATACGCCGA AGGCCGGATT
GTTTCCATGC TAGAGGGGGG CTATGCCTTA AATGCCCTAG GGCGAAGTGT CGTTGAACAT
GTAAAAGGTT TGATTGGTAG TTAA
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| Protein sequence | MTVGIISHHR CSRHNMGDHH PESPQRMGAI QDQLIRSGLE YVIHQYDATP IAREIIELAH
DKKYIDYIFD NAPKEGMFRV DDDTSMNPES LPAALLSAGA AINAVDLVMD KTLSAVFCAT
RPPGHHAEYD KGMGFCFFNN IAIAAAYAKK KYQLERVAIL DFDVHHGNGT ENIVKNKTGY
LFCSTYQYPF FPFEMQESNT PPIINTPLPA TTKGPEFRQA ITENWLPALH KFKPQLILIS
AGFDAHIEDE MSQISLTESD YRWVTDEIKI IADQYAEGRI VSMLEGGYAL NALGRSVVEH
VKGLIGS
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