Gene Ping_2678 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2678 
Symbol 
ID4625299 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3281762 
End bp3283108 
Gene Length1347 bp 
Protein Length448 aa 
Translation table11 
GC content53% 
IMG OID639797803 
Producthypothetical protein 
Protein accessionYP_943989 
Protein GI119946309 
COG category[S] Function unknown 
COG ID[COG4325] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.397076 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0401101 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAGT TAATACGGTT TTGGGGTGAT CTGCGATCGA GTTTCTGGTT TTTGCCTTTT 
CTGATCGTTC TGAGCAGCAT TATTTACGCG ATAGCGTTGA TCAGAATAGA CCGCGCCGGG
AGCGACCGAT GGCTGGGCCA GTGGCCGCAG ATATTTGGAG TCGGGGCGGA AGGCGCACGC
GAAATGTTGT CCACGCTCGC TGGTTCGATG ATGACGGTTA TGGGCATCAC GTTCTCCATG
ACCCTGCTGG CACTGACGCT GGCTTCTAGC CAGTACTCCT CACGCGTCTT GCGCAACTTT
ATGCGCAGCC GTGTCACGCA GGTTACGTTG GGAACCTTTG CCGGAATTTT CGTCTATTGT
TTGATCGTGA TGCACACTAT TCGCACTGTC GATGCGCCAT TCGTGCCCAG TGTGGCGGTG
TTTTTCGCCT TTCTTCTGGC ACTTGGCGGC ATTGCCGTCC TCATTTTTTT TATTCATCAC
ATTGCCTCGT CGATCCAGGC ATCCAACATC ATCGCCTCCG TCGCTCAGGA TACCTACGTT
TCTATCGATC GGCTGCTGCC AAAAAAACTG GATCATGAGC CCGATGAATA CGAAAGCCGG
AATCAGGTGC TCGAGTCACT GGATGAGAGG GTCTGGTATC CAGTGCCGGT AGCCGTGAGT
GGTTACATTC AAAGTGTGGA TTATGATGCG CTGCTGCAAC TGGCGGAGGA CAGCAGGACC
ATAGTGCGTA TGGAGCACGG CATCGGCGCG TTCGTTGTGC AAGATACGGC GCTAGTATCA
CTCGCCCTGA CCTACCCGCC AGACCAGAAG ATAATTGATG CACTTAATGG TGCTTACAGT
ATTGGCCGAA ATCGCCTCGT TGAGCAGGAT CCAGCTTTCG GTATCAGGCA AATTGTGGAT
ATAGCCATCA AGGCACTTTC TCCCGGAATC AATGACACCT CAACGGCGGT TATGTGCGTG
GACTATCTGG CTGCGATTCT GGCTCGGCTG GCCGGTAGAC AATTCCCGCC CGTGCAACGT
TACGAGGGAG AAACGCTGCG TGTGATAGCG ATCGTTCCGA GCTTTGAGGG GCTATTGGCC
GAGTCCTTCG ATCAGATTCG AGCTAACGCT GAAGTGAATG TTGCCATACT GGCGCGTATC
CTTAGCGCTT TTGATAGCAT CGGCAGCCTG ACGTTCAGAG ACAGTCACTT ACGAGCACTC
AACGAACAGC TGCAGTGCAT TGCCGAACTG GCCAATCGCT GCATCAAATC CAGCCATGAT
AGCGCGCGGC TCAAAAAGCG TTTGTCGGAG GTGCGTGAAA CGCTGAAAGC TCAGTCAGCA
TTGTGCGCAG CGGAAGATAA GGGCTAG
 
Protein sequence
MNKLIRFWGD LRSSFWFLPF LIVLSSIIYA IALIRIDRAG SDRWLGQWPQ IFGVGAEGAR 
EMLSTLAGSM MTVMGITFSM TLLALTLASS QYSSRVLRNF MRSRVTQVTL GTFAGIFVYC
LIVMHTIRTV DAPFVPSVAV FFAFLLALGG IAVLIFFIHH IASSIQASNI IASVAQDTYV
SIDRLLPKKL DHEPDEYESR NQVLESLDER VWYPVPVAVS GYIQSVDYDA LLQLAEDSRT
IVRMEHGIGA FVVQDTALVS LALTYPPDQK IIDALNGAYS IGRNRLVEQD PAFGIRQIVD
IAIKALSPGI NDTSTAVMCV DYLAAILARL AGRQFPPVQR YEGETLRVIA IVPSFEGLLA
ESFDQIRANA EVNVAILARI LSAFDSIGSL TFRDSHLRAL NEQLQCIAEL ANRCIKSSHD
SARLKKRLSE VRETLKAQSA LCAAEDKG