| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_2669 |
|---|
| Symbol | |
|---|
| ID | 4625290 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | + |
|---|
| Start bp | 3271177 |
|---|
| End bp | 3272058 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 639797795 |
|---|
| Product | transcriptional regulator, substrate-binding of LysR family protein |
|---|
| Protein accession | YP_943981 |
|---|
| Protein GI | 119946301 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.00829079 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTTAAAAC CTGAGATATT GGCATTTTTA GCGGTGGTCA AAACGGGCAG TTTTACCCGT
GCAGCAGAGC AGACAAAAAC ATCAAAATCC CGCGTATCAC AACAAGTATC GAGCTTAGAG
AAAACCCTCG GGATCACTCT GTTACATAGA TCAACCCGTA AAATACGACT AACAGATGCG
GGTGACGCTT ATTACAGCGA ATGCTCCCGA GCCGCCGCTA TTTTAGAACA AGCCAGAAAA
AACCTTAATG AGCGGCAAGA CCAGGTAGCC GGGCTGATTC GGCTCAATTC AGTCGGCGGT
TTATTCTCAG AAAAGATGCT TGCGCCTGCT GTTATTGCTT TTATGAAACA ATACCCACAA
GTTGAAATAC AACTCGATTT TAGCAGTGCA CAAGTTGATG TTATTGCTGA AAGCGTTGAC
TTAGTAGTAC GGATGGGACA ATTAAATAAT TCATCGCTTA TTGCGCGTAA GTTAATGGAG
ATAAAAACCG ATGTCGTGGC CAGCCCTGCG TTTATCAAAA AACAGGGAAA ACCCAATCAC
CCGCAACAAT TATCCCAGTT CAATTGTTTA TGCGGCAGCA TACGAAAATG GCACTTCCAG
CATAAAGGTT TAGAAAAAGC GCAGGATGTC ACAGTAACAG GCTCACTCTC CTCGGCCAAC
GGTCATATCT TATCGATGGC AGCTATTGAA GGGTTAGGAA TAGTGCGTTT AAACGAACTT
TACACTCACC AATATCTGCA AACCGGCCAA TTAATACCCG TCTTTGAACA ATGGCATATC
CCGGCGGTTC CGGTCTCGCT TATTTACCCC AAGGTGCGTT ATAAAACCAA ACGCATCCAA
GTATTTGTCG ATTTTCTGAT CGATTGGTTT GAGAATAAAT AA
|
|---|
| Protein sequence | MLKPEILAFL AVVKTGSFTR AAEQTKTSKS RVSQQVSSLE KTLGITLLHR STRKIRLTDA
GDAYYSECSR AAAILEQARK NLNERQDQVA GLIRLNSVGG LFSEKMLAPA VIAFMKQYPQ
VEIQLDFSSA QVDVIAESVD LVVRMGQLNN SSLIARKLME IKTDVVASPA FIKKQGKPNH
PQQLSQFNCL CGSIRKWHFQ HKGLEKAQDV TVTGSLSSAN GHILSMAAIE GLGIVRLNEL
YTHQYLQTGQ LIPVFEQWHI PAVPVSLIYP KVRYKTKRIQ VFVDFLIDWF ENK
|
|---|
| |