Gene Ping_2628 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2628 
Symbol 
ID4624336 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3224090 
End bp3224749 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content41% 
IMG OID639797757 
Producthypothetical protein 
Protein accessionYP_943945 
Protein GI119946265 
COG category[S] Function unknown 
COG ID[COG1738] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00697] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.916509 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTATCAC TAACTGCTGT TCAAATTCGC CGTGCGCTTG TCGTACTGGT TAGCTTCCAT 
ATTTTAATTA TTAGTGCCAG TAATTACCTC GTGCAGTTGC CATTTACAAT CTTTGGTTTG
CATACTACCT GGGGTGCATT CAGTTTCCCG TTTGTGTATC TTGCTACCGA CTTAACGGTC
AGAATTTTTG GTCAGGAAGC AGCGCGGAAA ATAATTCTTA AAGCGATGCT ACCCGCGTTA
ATTATTTCCT ATGTCATCGG CGTTATCTTT CACCAGGGTG GATTCAAAGG TTTTGGTGCG
TTGGCCGAAT TAAATACTTT TGTATTGCGT ATTGCATTTG CTAGTTTTGC AGCCTATTTT
GTTGGCCAGT TAATGGATAT AACCATCTTT GCACAATTAC GTAGAACACG CTCTTGGTGG
GTTGCACCTG CCTGTTCAAC GGTTATTGGT AATTTACTTG ATACTGCTGT CTTTTTTGGA
TTAGCATTTT ATGCCTCAAA TGATCTGTTT ATGGCAAATA ACTGGCCAGA GATAGCTACT
GTCGATTATG CGTTTAAATT GCTGGTGAGT TTAGGGCTGT TTTTACCCGC TTACGGTGTT
TTGTTAAAAG TACTTGAACA CAAACTGGTT ACCTTACCTG GGCAACAACG TTTCGCTTAA
 
Protein sequence
MLSLTAVQIR RALVVLVSFH ILIISASNYL VQLPFTIFGL HTTWGAFSFP FVYLATDLTV 
RIFGQEAARK IILKAMLPAL IISYVIGVIF HQGGFKGFGA LAELNTFVLR IAFASFAAYF
VGQLMDITIF AQLRRTRSWW VAPACSTVIG NLLDTAVFFG LAFYASNDLF MANNWPEIAT
VDYAFKLLVS LGLFLPAYGV LLKVLEHKLV TLPGQQRFA