| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_2595 |
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| Symbol | |
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| ID | 4624287 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | + |
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| Start bp | 3184510 |
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| End bp | 3186414 |
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| Gene Length | 1905 bp |
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| Protein Length | 634 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 639797726 |
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| Product | TRAP transporter, 4TM/12TM fusion protein |
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| Protein accession | YP_943914 |
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| Protein GI | 119946234 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4666] TRAP-type uncharacterized transport system, fused permease components |
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| TIGRFAM ID | [TIGR02123] TRAP transporter, 4TM/12TM fusion protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.379501 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACAA AGAACAACAT GTGCAGATTG ATAACGGATA AAGTATTATT AATAGCCGCA
TTTGCGGCTA TTTCATTATC TGTATTTCAA ATTTGGCAGG GCATTACCGC GGATTTATCC
GCACCCGTAT TTAGGCCCAT ACATTTAAGC TGGATACTGA TTTTAGTATT TTTTACCTTA
CCCCTTATAA AATCCCAGCA ATCTTCATTT CAATACCTGT TTGGACGCAG TCTGGATCTA
CTGTGCATTA TTGCGATCAC TTGGGCTTCA TATCATATTG TTTCATTCGA TTATGGTGAT
ATCAGTTTCT TAATGGACGG TTTGACAACA CTTGACCAGT TATCTGGTCT AATTATTGTG
GTGTTATTGC TTGAAGCGAC ACGCCGAACC GTTGGCCTGG TGATGGTTGT TATTGCCGTA
ATGTTTCTGC TGTATGCCAT ATTCGGCGAC ATACTACCTT CTAATGTCGC CAGTAAAGGA
TTTTCTATTG AGGAAATAGT CAGATTCCAT ATTTATTCAA CCAATGGTAT CTATGGTGCA
CCTTTAGCCA TTGCCGCTGG TGTGGTATTT ATCTTTGTAT TATTTGGCGC ATTCTTGCAG
GTAAGCGGCG CGGGTAAATT TTTTATCGAT GCGTCATTTT CAATTGCAGG TAAGTATCGA
GGCGGTCCTG CCAAAGCCAG CGTGATAGCC TCCGCGGCAC TAGGATCTAT TTCAGGCTCA
GCCATAGCTA ATACGGTCAC AACGGGCGCA TTAACTATTC CAATGATGAA AAAGCTGGGT
TATAAACCGG AACAAGCAGC CGGCATTGAA GCCGCAGCGT CAACGGGCGG ACAAATAATG
CCCCCTGTGA TGGGTGCTGG TGCCTTTGTT ATGGCACAAT TTACCGGTAT TCCCTACAGT
GAAATATTAT TAGTTTCTAT TGCCCCGGCT ATCTTGTATT TTGGTTGTAC CCTGCTGTAT
GTGCATTTAA TGGCCTGTAA GTTAGGGCTA AAAGGCATGG AAATAACTGA AAAAATATCA
GTAGTGTTGA AAAACGGATG GCATTTTTTA CTGCCATTAT TGTTAATTAC CAGCCTTCTT
TTAATGAGTT ATTCGCCTAT CTTAGTAGGT ATTGCGGGTT GTGTGGCGAT TTTAGTCGCT
GCTATGTGCA GAAAACACAG CCGCATCAGT ATTCCCGTCT TTATCCAAGG CCTTAAAGAA
GGCGCATTGC TTGCGCTTCC TATTTCAGTT GCTTGTGGCA CTGCGGGTAT TGTCGTCGGC
GTAGTAGGTC AAACGGGCAT AGGTTTACAA TTCACCCAAT TTTTAATGGC CCTTTCCGGT
GGTTATTTAT GGTCCGTATT GGGGCTTATT GCAGTTGCAG CTATGATTTT AGGGATGGGC
TTGCCGGTAA CAGCGGCTTA TATCGTTTTA TCTATTATGG CAGTGCCAAG TTTGACTGAA
CTCGGTGTGG GTTTATTAGC AGCTCATATG ATTGTATTCT GGTTATCTCA AACATCCAAT
GTAACACCTC CAATCGCCTT AGCAGCGTTT GCTGCAGCGG GTATAGCCAA TTGTTCACCC
ATGAAAGCCG CTGTGCAAGC CTTTAAATTA GCTCAGGGAT TTTTGATTAT TCCTATTATG
ATGGCATTTT CCGGGCTTAT TTGGATGGAG GGAGAAAATA CTGAATTTGT CATTTCAATC
GTGTTAACTA TCGGTTTAAT TATTGCTGTT GCGGGCAGTA TCGAAGGACG ATTACTGACC
GTATTACCTT TATACAGCAG AGTTTTGCTA TTGTTATCTG CATTTTCTTT ATTAGCCCCT
AATCATTTTA TAAATATTGC AGGCCTAATA ATTATTCTAA TGATTACTTT TGTGAATTAT
AAGCATTCTA AAGCCAGTGG TGACCAACAA GTTCAAAAGA GCTAA
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| Protein sequence | MNTKNNMCRL ITDKVLLIAA FAAISLSVFQ IWQGITADLS APVFRPIHLS WILILVFFTL
PLIKSQQSSF QYLFGRSLDL LCIIAITWAS YHIVSFDYGD ISFLMDGLTT LDQLSGLIIV
VLLLEATRRT VGLVMVVIAV MFLLYAIFGD ILPSNVASKG FSIEEIVRFH IYSTNGIYGA
PLAIAAGVVF IFVLFGAFLQ VSGAGKFFID ASFSIAGKYR GGPAKASVIA SAALGSISGS
AIANTVTTGA LTIPMMKKLG YKPEQAAGIE AAASTGGQIM PPVMGAGAFV MAQFTGIPYS
EILLVSIAPA ILYFGCTLLY VHLMACKLGL KGMEITEKIS VVLKNGWHFL LPLLLITSLL
LMSYSPILVG IAGCVAILVA AMCRKHSRIS IPVFIQGLKE GALLALPISV ACGTAGIVVG
VVGQTGIGLQ FTQFLMALSG GYLWSVLGLI AVAAMILGMG LPVTAAYIVL SIMAVPSLTE
LGVGLLAAHM IVFWLSQTSN VTPPIALAAF AAAGIANCSP MKAAVQAFKL AQGFLIIPIM
MAFSGLIWME GENTEFVISI VLTIGLIIAV AGSIEGRLLT VLPLYSRVLL LLSAFSLLAP
NHFINIAGLI IILMITFVNY KHSKASGDQQ VQKS
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