Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_2586 |
Symbol | |
ID | 4624277 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 3172265 |
End bp | 3173662 |
Gene Length | 1398 bp |
Protein Length | 465 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 639797716 |
Product | beta-lactamase domain-containing protein |
Protein accession | YP_943905 |
Protein GI | 119946225 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.563089 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.494624 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTTTTA TCCAATCATT TGGGGCTGCT GAGACAGTTA CCGGATCATG CCATCTTTTA CAGCTTAAAA ATGGATCTAA CATTTTAATT GATTGCGGTT ATTTTCAGGG GAGCAAAGAA GAGCAAACAT TTGAACCTTT TGGTTTTGAT CCTAAAAAAG TGGATATTTT ACTGATTACC CATGCGCATT TAGATCATGT CGGACGCATT CCTAAACTTA TCAAGGAGGG CTTTAACGGC AAAGTTATCG CCTCAAGAGC GAGCATGGAT CTGGCCGAAG TTATCTTAAT GGATAGCGCT AAAATTGCTG AGGAGGACTA TAAAATAGCA CTTAAAAAAG CCAAACGATC CGGTAATGAA AAACAGGTTA GACCGCCTAT TTACAGCATT GATGATGCAA AAGCCGTCTT TGATTTAACT ATCCAATATG CACAGTACAA TAAAAGCATT CAACTTACGC CTGAGGTAAA AGTTACTTTT CGTAATGCAG GACATATCCT TGGCTCGGCA ACCGTGCAAA TCGAGTTTAC TGAAGCAGGT CTCTCCAAAT CAGTTGTATT TAGTGGGGAC TTAGGCGGTC GGCGAGACTT AATTATGCCC GCCCCCTCTT TTGCTAAACA AGCCGATGCT CTTTATATTG AATCAACCTA CGGAGATCGT GATCATCGCG GTTTAAAGGA AACGGTTGAT GAATTTAAAG AAATCATTAT CAAGACCTTA AATAATAAGG GTAATGTATT GATCCCCTCC TTTGCGATTG AACGCACGCA AGAAATTTTG CTGCTGCTAA AGCAAATGTA TTACGACAAA GAGTTGCCCA AATGCCAAGT ATTTTTAGAT TCGCCAATGG CTATGCGTGC CACGCAAATT TATACCCGTT ATCATTCTGA ATTAAATGAG CCTGCCAAAA AATTGCTTGA GCGTGACGGC ACTATTTTTG ACTTTCCCTA TCTGCAATAT GCACTCAAAA ACCAAGATTC AATGCTGATT AATAACATAG AAAGCGGCTG CATTATCATT GCCGGGAGTG GTATGTGCAC CGGTGGGCGG ATTTTGCAGC ACTTTAAACA TCGTCTATGG GATGCGCGTA ACAGTGTCAT CTTTGTTGGT TATCAAGTGC AGGATACCTT AGGACGAAAA ATGATTGATG GAGCAGAAAC AATCCAGCTT TATCACGAAA ATATTAAAGT AAATGCGCAG ATACATATGA TTAACGGATT TTCTGCCCAT GCTGATCAAA GCGATCTTTT AGCTTGGATA AGCGAATTTG AAAAACTCGA TAAAGTATTT TTAATACATG GAGAACCTGA CAAACAGGCG ATTTTTAAAC AAATCATTGA AGAGCAGTTA CATAAACCCA CACATATTGT TAAATATGCG GAACAAATTT ATATTTAA
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Protein sequence | MAFIQSFGAA ETVTGSCHLL QLKNGSNILI DCGYFQGSKE EQTFEPFGFD PKKVDILLIT HAHLDHVGRI PKLIKEGFNG KVIASRASMD LAEVILMDSA KIAEEDYKIA LKKAKRSGNE KQVRPPIYSI DDAKAVFDLT IQYAQYNKSI QLTPEVKVTF RNAGHILGSA TVQIEFTEAG LSKSVVFSGD LGGRRDLIMP APSFAKQADA LYIESTYGDR DHRGLKETVD EFKEIIIKTL NNKGNVLIPS FAIERTQEIL LLLKQMYYDK ELPKCQVFLD SPMAMRATQI YTRYHSELNE PAKKLLERDG TIFDFPYLQY ALKNQDSMLI NNIESGCIII AGSGMCTGGR ILQHFKHRLW DARNSVIFVG YQVQDTLGRK MIDGAETIQL YHENIKVNAQ IHMINGFSAH ADQSDLLAWI SEFEKLDKVF LIHGEPDKQA IFKQIIEEQL HKPTHIVKYA EQIYI
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