Gene Ping_2580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2580 
Symbol 
ID4624230 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3162051 
End bp3162821 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content40% 
IMG OID639797709 
Productdeoxyribonuclease I 
Protein accessionYP_943900 
Protein GI119946220 
COG category[L] Replication, recombination and repair 
COG ID[COG2356] Endonuclease I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.316828 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTACAA CAAGAATATC GTTCTTCTCA CCTATCCGAA TAACGACATT AATTTTATTA 
CTAGCATTTA GCGCTATCAG TTACGCAGCT GGCAACACCA CCAAGGACTC GTTTTCAAAA
GCCAAAAAGA TGTTAGAAAA ATCGGTTTAT TTTGACCACC GTGAAACTAT CTACTGCGCA
GCTTCTTTTG ACTCCAAAAA ACAGATAACA GCACCCAATG GTTTTCATAC ATCAAAATAC
GTGAAACGTG CTAAGAAATT GGAGTGGGAG CATGTCGTTC CGGCTGAAAA CTTTGGACGT
ACATTTAAAG AGTGGCCAGA AGGTTCTCCA CAATGTAGTA ACAATAAAGG TAAGTCATTC
AAAGACCGCA GATGTGCTGA GAAAGTTAAT GTTGAGTACC GGCATATGCA AGCGGATATG
TTCAACTTGT ACCCGGCCAT TGGCGCTGTT AAAGCACTCA GAAGTAATTA CAATTTCACT
ATGCTACCTG AGGAGGCCAG TGATTTTGGC AGTTGTAAAA TGAAAATAGA CAATAGGAAA
GCAGAGCCAC CTGTAGAAGC TCGTGGCCGC ATTGCTAGGA CGTATCTTTA TATGGATGAG
ACTTATTCCA GATATAGCAT GAGCAAATCT CAGAAGCAGT TAATGAACGC TTGGGATAAA
ATGTATCCTG TAAATGAATG GGAGTGTAAA AGAGCTAAGA AAATAACGAG TTTGCAAGGT
GGAGATAATA ACGTTGTAAA ATTAAGATGT ACGGATAAAG GGTTATGGTA A
 
Protein sequence
MATTRISFFS PIRITTLILL LAFSAISYAA GNTTKDSFSK AKKMLEKSVY FDHRETIYCA 
ASFDSKKQIT APNGFHTSKY VKRAKKLEWE HVVPAENFGR TFKEWPEGSP QCSNNKGKSF
KDRRCAEKVN VEYRHMQADM FNLYPAIGAV KALRSNYNFT MLPEEASDFG SCKMKIDNRK
AEPPVEARGR IARTYLYMDE TYSRYSMSKS QKQLMNAWDK MYPVNEWECK RAKKITSLQG
GDNNVVKLRC TDKGLW