Gene Ping_2567 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2567 
Symbol 
ID4624217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3147034 
End bp3147480 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content40% 
IMG OID639797696 
Productnuclease 
Protein accessionYP_943887 
Protein GI119946207 
COG category[L] Replication, recombination and repair 
COG ID[COG1525] Micrococcal nuclease (thermonuclease) homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.190384 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAAAAAT TACTTTTATT CGTTTTGTTA ATAACACCAC TTTCACTTTT TGCTAAGCCT 
AAAAATTACG GTTCAGTCTT AGTTGTAGAG GTCACCAGTA TTTACGATGC AGATACGTTC
AGAGTAAATA TTAATGACTG GCCTTCCCTC ATTGGTGAGA ATGTTCGTAT CCGAGTGAAT
GGTGTTGATG CACCAGAAAT TCGGGGGAAA TGTGATTCTG AAAAAAAAGG CGCTCGATTA
GCTAAACAAT TCACGGTCGG CAAGCTCAGG AACGCCAAAA CAATTGAGTT GCGCAATATG
CAGCGTGGAA AATACTTTAG AATTCTTGCT GATGTCTATG TCGATGGGAA AAATCTGACC
GAACTGCTTA TTACAGCCAA ACTTGCGCGG CCTTATGATG GTGGCAAAAG AAAGGGGTGG
TGTGATAACT CATCCCCAGT TAATTAA
 
Protein sequence
MKKLLLFVLL ITPLSLFAKP KNYGSVLVVE VTSIYDADTF RVNINDWPSL IGENVRIRVN 
GVDAPEIRGK CDSEKKGARL AKQFTVGKLR NAKTIELRNM QRGKYFRILA DVYVDGKNLT
ELLITAKLAR PYDGGKRKGW CDNSSPVN