Gene Ping_2512 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2512 
Symbol 
ID4626601 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3069128 
End bp3070210 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content39% 
IMG OID639797638 
ProductABC transporter ATP-binding protein 
Protein accessionYP_943832 
Protein GI119946152 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.408974 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.94843 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCAGA TTTCACTAAA AAAAATAGTA AAAAACTATG GTTCTACCAA TATTATTAAA 
GGGATTGATT TAGAAATAAA CTCGGGTGAA TTTGTTGTTT TTGTCGGTCC ATCGGGGTGC
GGTAAGTCTA CATTGTTACG TATGATTGCT GGACTTGAGG ATATCAGTGG TGGTGAACTA
ACGATAGAAG ATCAACTAAT GAATAAAGTG GATGCTTCTG AACGTGGTGT TGCCATGGTG
TTTCAGTCAT ATGCTTTGTA TCCGCATATG ACTGTGGCAG AAAATATCGG GTTTAGCATA
AAAATGGCCG GTAAAAAACA AAGTGAAATT GACGGAGCAG TATCATTAGC TGCCAAGAGT
CTACAATTAA CTCCCTTGCT CGACCGAAAA CCAGCTAATC TTTCAGGTGG GCAGCGTCAG
CGTGTTGCTA TTGGGCGAGC GATTGTAAAA AAACCTAAAG TTTTTTTATT TGATGAGCCA
CTTTCAAACC TCGATGCTGA ATTACGCGTG GATATGCGAT TAGAGATTGC ACGATTACAT
CGAGAAATGG GTGCAACCAT GGTTTATGTT ACGCACGATC AAACCGAAGC AATGACATTG
GCGGATAAGA TAGTGGTACT AAGAGCCGGT AATATAGAGC AGGTTGGAAG CCCAATCGAA
TTATATAAGA AACCTAATAA TACTTTTGTT GCTGGTTTTA TCGGTTCACC TCAAATGAAT
ATGATTCCGG CAAAAATTTA TTCTCTAAAT GGTGAAATCG CGACGATTGA ATTAGGAGAA
AACGTCTTAG TAGAGAAACG CATACAGTCA GGTGCTGTCA ATGTGGGAGA TGAGGTACTG
TTTGGTATTC GCCCTGAACA TATTTCTTTG GAAAAAAATG ACCATGTTTC GCTTCCTATG
ACAGTGAGAG ATATCGAAAG GTTGGGTAAC AGCACCTGTT TATTTGGCAA TTTTTCGACT
TACAATAAGT TAAAAGTGCA CCTTTCAGAA GACCAGGAAC TTAAACTTGA TAGCGAAATT
GAAGTGTTTT TCAATGGTGA TGATAGCCAT ATCTTCTATC GCGACAACCG TATCTCACTC
TAA
 
Protein sequence
MSQISLKKIV KNYGSTNIIK GIDLEINSGE FVVFVGPSGC GKSTLLRMIA GLEDISGGEL 
TIEDQLMNKV DASERGVAMV FQSYALYPHM TVAENIGFSI KMAGKKQSEI DGAVSLAAKS
LQLTPLLDRK PANLSGGQRQ RVAIGRAIVK KPKVFLFDEP LSNLDAELRV DMRLEIARLH
REMGATMVYV THDQTEAMTL ADKIVVLRAG NIEQVGSPIE LYKKPNNTFV AGFIGSPQMN
MIPAKIYSLN GEIATIELGE NVLVEKRIQS GAVNVGDEVL FGIRPEHISL EKNDHVSLPM
TVRDIERLGN STCLFGNFST YNKLKVHLSE DQELKLDSEI EVFFNGDDSH IFYRDNRISL