Gene Ping_2496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2496 
Symbol 
ID4623529 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3053581 
End bp3054807 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content42% 
IMG OID639797627 
Productphage integrase family protein 
Protein accessionYP_943821 
Protein GI119946141 
COG category[L] Replication, recombination and repair 
COG ID[COG0582] Integrase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0214559 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAGA TAATTAAGCC TCTTTCACCT ACTGACGTTT CAACAGCAGA AACTAAAGAA 
AGTGAATATA ACCTTAGCGA TGGGAATGGC CTTTTCTTAC GTGTTAAACC GGTTGGTAGT
AAATTTTGGA TCTTCAATTA CCAACGTCCA ATTACAAAAA AACGTGCCAA TCTAACTTTA
GGCAGGTATC CAGATTTACC TCTAGCTAAA GCTCGAACAA AAGCAATTGA AGCAAGGGAA
CTACTAGCTG AAGGTATCGA TCCAAAAGAA CACCGTGATT CAACCTTAAA AGCTAAACAA
GCAGAGCTCA GTAATACCCT GCAAGTTGTC TTTGAAGATT GGTTTACCGT TAAAAAAACC
AGCATTAAAG AATTAACCGC TAAAAAACTC AAACAACGCT TAGATAAATA CCTGTTAACT
TATCTTGGCA AATTTCCTAT TAGTGAAATC ACCGCCCCAC AGACGATCAA AATCCTGCAG
CCAGTTGCGA ACCAGGGCAA GCTTGAAACC GTTGCCAGAC TTTGCCGCAA CCTTAATGAA
ATAATGGTGT TTGCAGTTAA CACTGGCATC ATTGAACACA ATAAACTTGC CGGTATTGGC
AAAGCGTTTG CAAACGCTCA AGTCACTAAC CAAGCTTCAC TGAAGCCAGA AGAGCTACCA
GAGCTATTAA CTGCCCTTAA CTACGCTGAT ATAAAGCTTA TCACTCGCTG TTTGATTGAA
TGGCAATTAC ATACAATGAC CCGCCCTTCT GAAACAGCTG GGGCTCGCTG GGATGAAATT
GATAGAGAAA ATAAACTTTG GCACATCCCA GCAGAGCGAA TGAAAAAAGG CAGACCGCAT
ACAGTCCTCC TAACAACACA AACACTCGCG CTGTTAGAGA CAATTGATGC AATTACAGGT
GACAGTGAAT ATATTTTCCC TGCTGACAAA ACCAATAAAA AACACATTAA TAAAGAAACA
GCAAACAAAG CATTACAAAG AATGGGCTTT AAAGGTCGCC AGACGTCACA CGGATTACGT
GCCCTGGCAA GTACCACCCT GAATGAGCAA AACGTCTTCG ATGCAGACGT GATTGAGGCC
GCCCTTTCAC ACGTTGATAA AGTGAGAAGT GCTTACAACC GCACTGACTA CCTTGAGCGC
CGCCGCGTAC TAATGGGCTG CTGGAGTGAT CATATTGAAG CAGCATCGAA AGGATCTAAC
TCAATCACAG GATTAAAGGG AATGTGA
 
Protein sequence
MAKIIKPLSP TDVSTAETKE SEYNLSDGNG LFLRVKPVGS KFWIFNYQRP ITKKRANLTL 
GRYPDLPLAK ARTKAIEARE LLAEGIDPKE HRDSTLKAKQ AELSNTLQVV FEDWFTVKKT
SIKELTAKKL KQRLDKYLLT YLGKFPISEI TAPQTIKILQ PVANQGKLET VARLCRNLNE
IMVFAVNTGI IEHNKLAGIG KAFANAQVTN QASLKPEELP ELLTALNYAD IKLITRCLIE
WQLHTMTRPS ETAGARWDEI DRENKLWHIP AERMKKGRPH TVLLTTQTLA LLETIDAITG
DSEYIFPADK TNKKHINKET ANKALQRMGF KGRQTSHGLR ALASTTLNEQ NVFDADVIEA
ALSHVDKVRS AYNRTDYLER RRVLMGCWSD HIEAASKGSN SITGLKGM