| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_2487 |
|---|
| Symbol | |
|---|
| ID | 4623520 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | - |
|---|
| Start bp | 3041144 |
|---|
| End bp | 3043120 |
|---|
| Gene Length | 1977 bp |
|---|
| Protein Length | 658 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 639797620 |
|---|
| Product | DNA methylase N-4/N-6 domain-containing protein |
|---|
| Protein accession | YP_943814 |
|---|
| Protein GI | 119946134 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2189] Adenine specific DNA methylase Mod |
|---|
| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.661764 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0354295 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATAAAT TAAAAATGCA CAGCCCTAAC TTGGTTGACC AAAATTTAGA AAAAATGGCC
GAGTTATTTC CAAATTGTAT TACTGAAGCT AAAGATGAAC TTGGACAGCT TAAAAAGTCC
ATCGATTTTG ATTTGCTTAA GCAAGAACTT TCTCGCCACA TTGTTGATGG CCCACAAGAA
CGCTATCAAC TTAACTGGCC AGGTAAGCGC GAAGCGCTGT TAACAGCCAA TGCTCCAATT
GCTAAAACAT TACGACCGTG TCGCGAAGAA AGTGTCAATT TTGATACTAC AGAAAACCTT
TTTATTGAAG GTGATAACCT AGATGCTTTA AAGCTTTTAC AAGAAACGTA CCTTGGTAAA
GTGAAGATGA TATACATCGA TCCTCCATAC AATACTGGGA ATGATTTTAT CTATAAAGAT
GATTTCGCAG AAAATGCAGA TTCCTATGCG AAGAAATCTA ATCAACAAGA TGAAATAGGT
AATCGCTTAG TTGCTAATAC AGATTCCAAC GGGCGTTATC ATTCTGATTG GACTTCAATG
ATATACTCGC GACTGAGGTT AGCCAGAAAC TTACTTACGG AAGATGGTGT TATTTTTATG
TCTATTGGAC AGGAAGAAGT CGCAGCATCC TGTCAAATAT TGAATGAAGT TCTAGGTGAG
AATAACTTTA TTACAATAAT TTCAAGAGTA ATGAAAACCG GGGGACAGAA AGGTGTTCAT
TTCTCTCCTT GTGTTGATTA TATTCTTGTA TATGCGAAAA AAATTGAACA TCTAAATCAA
TTTCGAGAAG AAATAAGTCA AAATGTAATA GATAAAGTTT ATACAAAAAC GTGTACAGAA
GGGCTGAGGA AGGGCGAAAA ATATCGTTCG ATGGGGTTGT ATCAAGCAAT GTTAGATAAA
CGCGCTAACC AGCGATATTA CATCGAATGT CCAGATGGAT CTTATGTTAT ACCACCAGGT
GAATTGATGC CAAACTCACC TAAAGATGGA AATAAGGTAA CACCTCAAGA TGGTGACGGT
GTATGGAGGT GGACATATGA ACGTTTTGCT AGAGAAAGAG CCGCCGGTAA TGTTGAATTC
ATCGCATCAG ATAGAACATC ACTTATTGAT AATGAAGGGA AGCAAGCAAA GTGGAATGTA
TATTATCGGA TTTGGCTAAA AGATCGTATG CGAGATGGTC AATTACCGGG AAATATAACT
GAAAAATTTC AGAGTCGTCA TAGTTCAGCC GAATTAAAAA ATATTGGGAT ACCATTTGAT
TTCCCTAAAC CTACAAGTCT CATTAGATAT TTAATGACTT TGGTTTCTCT AAATGATAAC
GATGTTATTC TTGATTTTTT TGCTGGTTCC GGGACTACTG CGCATGCCTC AATTGAATAT
GCTAAAGATA ACAATTGCAA CAATAAATTT GTTTGCGTTC AGTTAAGAGA GGAAACGAAT
AAAAATTCTT CAGAATATAA AGCGGGATAT GAAGCAATTT CAGATATTAC TAAAGAACGT
ATACGGAGGG CTGGCCAAAA AATACTATCT GATAATGCTG CAAAAGATGG TATAGAAAAG
CTAGATGTGG GTTTTCGTGT TCTAAAAGTT GATAGTTCCA ATATGGCTGA CGTTCATTAC
AATCCTGGCG CTGTTTCTCA AGCCGGGTTA TTTGATCAAG TTGAAAATGT AAAAGAAAAC
CGTACGGAAG AAGATTTATT ATTTCAAGTG ATACTTGATT GGGGCGTCGA TTTAACCTTG
CCTATTCGTA AAGAAACCAT TGATGGTAAA ACCGTGTTTT TTGTTGATAA CAACGCACTT
GTTGCTTGTT TTGATAACAG CGGAAAAGTA TCTGAATCCT TTGTTAAACA ACTCGCTGAA
TTTGAACCAA TGCGTTTAGT TTTCCGTGAT GGCGGTTTTG CCTCTGATAG CGCCAAAATT
AATGTTGAAC AAGTATTAAA ACAACTTTCA CCACTTACCG ATATGAAGTC GATTTAA
|
|---|
| Protein sequence | MDKLKMHSPN LVDQNLEKMA ELFPNCITEA KDELGQLKKS IDFDLLKQEL SRHIVDGPQE
RYQLNWPGKR EALLTANAPI AKTLRPCREE SVNFDTTENL FIEGDNLDAL KLLQETYLGK
VKMIYIDPPY NTGNDFIYKD DFAENADSYA KKSNQQDEIG NRLVANTDSN GRYHSDWTSM
IYSRLRLARN LLTEDGVIFM SIGQEEVAAS CQILNEVLGE NNFITIISRV MKTGGQKGVH
FSPCVDYILV YAKKIEHLNQ FREEISQNVI DKVYTKTCTE GLRKGEKYRS MGLYQAMLDK
RANQRYYIEC PDGSYVIPPG ELMPNSPKDG NKVTPQDGDG VWRWTYERFA RERAAGNVEF
IASDRTSLID NEGKQAKWNV YYRIWLKDRM RDGQLPGNIT EKFQSRHSSA ELKNIGIPFD
FPKPTSLIRY LMTLVSLNDN DVILDFFAGS GTTAHASIEY AKDNNCNNKF VCVQLREETN
KNSSEYKAGY EAISDITKER IRRAGQKILS DNAAKDGIEK LDVGFRVLKV DSSNMADVHY
NPGAVSQAGL FDQVENVKEN RTEEDLLFQV ILDWGVDLTL PIRKETIDGK TVFFVDNNAL
VACFDNSGKV SESFVKQLAE FEPMRLVFRD GGFASDSAKI NVEQVLKQLS PLTDMKSI
|
|---|
| |