| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_2470 |
|---|
| Symbol | |
|---|
| ID | 4624422 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | - |
|---|
| Start bp | 3020797 |
|---|
| End bp | 3021468 |
|---|
| Gene Length | 672 bp |
|---|
| Protein Length | 223 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 639797606 |
|---|
| Product | GDSL-lilke lipase/acylhydrolase family protein |
|---|
| Protein accession | YP_943800 |
|---|
| Protein GI | 119946120 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.113871 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.268506 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACTACC GTAATGAATG CGAACCTGTA GGAACTTATA CAATACTAAA ACAAGTCACC
TTGTTAGGTG ATTCCATATT CGACAACGCT CCCTATGTTG AGGAAGGCGA GTCTGTTTCA
GATCAACTTC AAGCCTTATT TCAAAATTCC GCCAAAGTAC ATCTTCTCGC AGTGGATGGC
CATGTGATGG CCGACATTTC AGACCAGTTG ACTAAGGCCG AATCCATATA CCCACTAGAT
CATGTATTTC TAACATGCGG AGGCAATGAC CTACTGGGTT ATAGCGGCGC GGGGCTACTA
GCAGTCATGG CAAACAGTAT TGGTGATGCT TTAAACTCTA TATACCAAGT GCGGGAGAAT
TTTCGTCAAA ATTATCAGGA AATGTTGGAT TCTGTTTTAG CAAAATGTTC AATACTAACC
GTATGCACTA TTTATGACAA AATTCCCAAT CTTAGTAATG CAGAGCAAGT GGCTGTAGGT
ATCTTTAACG AAGTTATTTT ACGTGAAGCA AAAGTAAGAG AGCTGAACGT ACTTGATTTA
CGCACACTCT GTGATCAGGT TGAAGATTTT TCACCAGTAT CCCCTATTGA GCCATCAAAA
CAAGGCGCAG CTAAAATTGC CTCTGCTATT TATCAACAGT GTATGACTTA TTCAGCGGAA
AATAACATTT AA
|
|---|
| Protein sequence | MDYRNECEPV GTYTILKQVT LLGDSIFDNA PYVEEGESVS DQLQALFQNS AKVHLLAVDG
HVMADISDQL TKAESIYPLD HVFLTCGGND LLGYSGAGLL AVMANSIGDA LNSIYQVREN
FRQNYQEMLD SVLAKCSILT VCTIYDKIPN LSNAEQVAVG IFNEVILREA KVRELNVLDL
RTLCDQVEDF SPVSPIEPSK QGAAKIASAI YQQCMTYSAE NNI
|
|---|
| |