Gene Ping_2465 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2465 
Symbol 
ID4624417 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3016667 
End bp3017563 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content38% 
IMG OID639797601 
Producthypothetical protein 
Protein accessionYP_943795 
Protein GI119946115 
COG category[K] Transcription 
COG ID[COG2378] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.107107 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.276307 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAGCAG CTAATAATCA ACGCATTGAT GGTTTAAGCC AATTAACGCT ACAGCGTTAT 
CAATTAATCG AAATTATTGC CTATTGGGAA GGTCGTCTTA CCACAAATCA CTTGTGTAAA
GGCTTTGATA TTGGTCGCCA ACAAGCATCT CGCTTTATCA ACGCTTACTT AAGTGAAATT
GCACCTGATA ACTTAATCTA TGATACACAG TTACGGGGTT ATAAACCTGC TGATGACTTT
AGGCCCCGTG TAACCAACGG ACATATTGAA GAGTACTTAA ATTTATTACG CTTTAATCAT
AACCTAGTGT CTAAAAATAA CCATGTAACG CTTGGCCTGC GTGACATTTG TTCAGTGACC
CCTCCGCCAC GCTATATTGA ACCCGTTGTG ATCAGGGGAA TTGTCAGGGC GATAACAGAA
AAGCGCCGCG TTGAAATAGA ATACCTTTCA TTCGAAAATC CTGAGCCTGA AATCAGAGTC
ATCGCGCCAC ATTCGTTGGT TGAATCGCCA TTAAGATGGC ATGTTCGTGC GTATTGTGAA
AAAAACAAAG ACTATCGCGA TTTTGTATTA AGTCGCTTTA TTAATAAACC AGATTTAATA
GATTCAACAA TAAACACCTT AGAATATGAT AATAATTGGT GTACACCGAT GAACATTATA
CTACAGCCGG ATCCCCGTCT TAAAACGCAT CAGAAAGCGT TAGTTGAACG TGATTATGAT
ATGAGCAAGG GTCAGCTTGT TATTCCAACA CGTCTGGCAT TGGTCAATTA TATGCTCTCC
TCCTTAGGTT TAGATTTATT TAGTGTTAAG TCTCAGCCAA ATTTTCAACA AGTATCGATT
AAAAACCTGA CTGAAATTCA AGGTGTTTTA AGTCAAAGAG GGTTATTAAG AATTTGA
 
Protein sequence
MVAANNQRID GLSQLTLQRY QLIEIIAYWE GRLTTNHLCK GFDIGRQQAS RFINAYLSEI 
APDNLIYDTQ LRGYKPADDF RPRVTNGHIE EYLNLLRFNH NLVSKNNHVT LGLRDICSVT
PPPRYIEPVV IRGIVRAITE KRRVEIEYLS FENPEPEIRV IAPHSLVESP LRWHVRAYCE
KNKDYRDFVL SRFINKPDLI DSTINTLEYD NNWCTPMNII LQPDPRLKTH QKALVERDYD
MSKGQLVIPT RLALVNYMLS SLGLDLFSVK SQPNFQQVSI KNLTEIQGVL SQRGLLRI