Gene Ping_2439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2439 
Symbol 
ID4626405 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2987976 
End bp2988233 
Gene Length258 bp 
Protein Length85 aa 
Translation table11 
GC content38% 
IMG OID639797574 
Productphosphotransferase system, phosphocarrier protein HPr 
Protein accessionYP_943769 
Protein GI119946089 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1925] Phosphotransferase system, HPr-related proteins 
TIGRFAM ID[TIGR01003] Phosphotransferase System HPr (HPr) Family 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0660823 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0766311 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGAAC AAAAAGTAAC TATCACTGCA CCAAACGGCC TTCATACTCG TCCAGCAGCA 
CAATTTGTAA AAGAAGCTAA ATCTTTTGAA TCTGTCATTG CGGTTGAAGT TGGTGAAAAA
TCTGCGAGTG CCAAAAGTCT TTTTAAACTA CAAACGTTAG GATTAACTCA GGGCACTGAA
GTAAACATTA AAGCTGAAGG TAGCGATGAA CAAAAAGCCG TTGAAGCACT GATTGAACTA
ATGGCCACTT TGGTATAA
 
Protein sequence
MFEQKVTITA PNGLHTRPAA QFVKEAKSFE SVIAVEVGEK SASAKSLFKL QTLGLTQGTE 
VNIKAEGSDE QKAVEALIEL MATLV