| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_2438 |
|---|
| Symbol | |
|---|
| ID | 4626404 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | + |
|---|
| Start bp | 2986470 |
|---|
| End bp | 2987441 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 639797573 |
|---|
| Product | cysteine synthase A |
|---|
| Protein accession | YP_943768 |
|---|
| Protein GI | 119946088 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0031] Cysteine synthase |
|---|
| TIGRFAM ID | [TIGR01136] cysteine synthases
[TIGR01139] cysteine synthase A |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.241795 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.088242 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAAACA TATTTAGTGA CCATTCACAA GCTATCGGCA AAACACCTCT GGTCCGCTTA
AATAACGTTA CATCTGGTAA TGTTTTTGCA AAAATAGAAA GCCGTAACCC AAGCTTCAGT
GTTAAATGCC GTATTGGTGC AAACATGATT TGGGACGCAG AGAAGAAAGG CACGTTAACT
AAAGATGTTG AACTTGTTGA GCCTACAAGT GGAAATACCG GTATTGCGCT GGCGTTTGTT
GCCGCTGCAC GTGGTTATAA AATCACCTTA ACGATGCCAA ATACAATGAG TATTGAGCGT
CGTAAGTTAT TAAAAGCATT AGGGGCTAAT TTAGTATTAA CCGATGGCGC AAAAGGTATG
AAAGGTGCGA TTGCTGAAGC TGAAGCTATT GTGAGTACAG ATCCTTCTAA ATACTTGTTA
TTACAACAAT TCGATAACCC AGCTAACCCT GAAATTCATG AAAAAACAAC AGGTCCTGAA
ATTTGGAATG ATACCGATGG CGAAATCGAT GTATTTGTTG CTGGAGTGGG TACTGGTGGG
ACAATCACAG GTGTCAGTCG TTATATTAAG CAGACTCAAG GTAAAGCAAT TATTAGTGTT
GCTGTTGAGC CAACAAACTC TCAGGTGATT GCACAAACGC TCGCCGGTGA AGAAGTCAAA
CCTGGCCCGC ATAAAATTCA AGGTATTGGC GCTGGTTTTA TTCCAAAGAA TTTAGATCTT
TCTTTAATTG ATCGTGTTGA AGCGGTCAGT AATGAAGATT CAATCGCAAT GGCGCGTCGT
TTAATGGAAG AAGAAGGTAT TCTAGCAGGA ATTTCATCGG GCGCTGCCGT TGTTGCTGCT
GCTCGTTTAG CCGAGCTAGA TGAATTTAAA GACAAAAACA TTGTTGTTAT TTTAGCAAGT
GCAGCTGAAC GTTATTTATC AAGCGCACTT TTTGCAGGTG CTTTTGAAGG TGAAAATTTC
CCTTCAATAT AG
|
|---|
| Protein sequence | MSNIFSDHSQ AIGKTPLVRL NNVTSGNVFA KIESRNPSFS VKCRIGANMI WDAEKKGTLT
KDVELVEPTS GNTGIALAFV AAARGYKITL TMPNTMSIER RKLLKALGAN LVLTDGAKGM
KGAIAEAEAI VSTDPSKYLL LQQFDNPANP EIHEKTTGPE IWNDTDGEID VFVAGVGTGG
TITGVSRYIK QTQGKAIISV AVEPTNSQVI AQTLAGEEVK PGPHKIQGIG AGFIPKNLDL
SLIDRVEAVS NEDSIAMARR LMEEEGILAG ISSGAAVVAA ARLAELDEFK DKNIVVILAS
AAERYLSSAL FAGAFEGENF PSI
|
|---|
| |