Gene Ping_2436 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2436 
Symbol 
ID4626402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2984434 
End bp2985894 
Gene Length1461 bp 
Protein Length486 aa 
Translation table11 
GC content41% 
IMG OID639797571 
Productexodeoxyribonuclease I 
Protein accessionYP_943766 
Protein GI119946086 
COG category[L] Replication, recombination and repair 
COG ID[COG2925] Exonuclease I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.152961 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.173685 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAATT CAGCACAAGA AACAACACAA AAAAACACCG GCGATCAGCC TACGTTATAC 
TGGCACGATT ATGAAACCTT TGGACTTAAT CCTGGAACAG ATCGCCCTGC TCAATTTGCC
GGTATTCGTA CCGATCTCGA TTTAAATATT ATCTCTGAAC CTGATGAATG GTACTGCCGA
CCGCCCAATG ACTACCTTCC AAATCCTGAA GCCTGCTTAA TTACCGGGAT CACACCACAA
CGTGCATTAC AAAAAGGCAT GGTAGAAAGT GAGTTTATTG CGCTTATTAA TCAACGGTTC
AGCCAGAAAA ACACCTGTGT TGTGGGTTAT AACAATATAC GTTTTGATGA TGAAATAACG
CGCTTTACGC TGTATCGAAA TTTTCGCGAT CCTTATCAGC GTGAATGGAA AAATGGCTGT
TCGCGCTGGG ATATTATCGA TCTGGTAAGA GCTTGTTATG CTTTGCGTCC TGAGGGTATA
AATTGGCCCG TCGATGAGAA TGATGCACCC TCCTTTCGTT TAGAGTTGTT AACCAAAGAA
AATGGCCTCG CGCACCAACA AGCGCATGAT GCAATGTCAG ATGTTTATGC CACCATTGCC
ATGGCAAAGT TAATAAAAGA AACACATCCT AAGCTCTATG ATTATTTCTT TGGCCTGCGT
AAAAAAAATA ATGTTATGGC GCAACTTAAA CTGGGGAGTA ATACACCCGT AGTGCATGTT
TCGGGAATGT TTCCAGCCCT CCAAGGCTGC GCATCCTACG TGATGCCTAT CACGCAACAT
CCTTCTAATA AAAATGCCGT TATAGTCGTT GATTTAAATA AAGATTTAAG CGGGTTAGCA
ACACTTTCGA TAGAACAAAT ACAAACCTAC TTATATACCC CCAGTATTGA TTTACCGGAA
GGCATTGAAC GACCCGCCAT AAAATTAATC CATATTAATA AATGTCCTAT TATTGCACCG
GCAAAAACAT TAACCGAGGA ACGTGCCGAT CAATTGGGGA TTGATCGAAA ACAATGTCGA
CGTTCATTAG ATTTTTTAAG TAACCAGCCA GAACTTGCAG AAAAACTACA AAAGGTTTTT
ATACAGGAAA CGCCGAGTAC GGAAAATAAA TCCGTGGAGG AGATGTTATA TAGCGGAGGA
TTCTTGTCTG CGGCAGACAA AGCGCTAAGC GAAGAAGTTT GTAACAGCAC TTGGCCAGCG
TTAGGTAATA AAGAATTCAA CTTTGAAGAC GACCGATTAG GCATACTATT ATGGCATTAC
AGGGCCAGAA ATGCACCAGA TTCATTGGAT GTAGCAGAGC AGGAGAAATG GGCAAGGCAC
CGCCAAAATT ATTTATTAGA AAACAGTGAA GCCTATATTG AAAAACTTGA AGCGCTTGCA
CTTGAAAATC AGAGCAATCC GGAAAAAATA GAATTATTGA AGCAACTATA TGATTATTTG
AATTATTTAA ACTATGAATA A
 
Protein sequence
MSNSAQETTQ KNTGDQPTLY WHDYETFGLN PGTDRPAQFA GIRTDLDLNI ISEPDEWYCR 
PPNDYLPNPE ACLITGITPQ RALQKGMVES EFIALINQRF SQKNTCVVGY NNIRFDDEIT
RFTLYRNFRD PYQREWKNGC SRWDIIDLVR ACYALRPEGI NWPVDENDAP SFRLELLTKE
NGLAHQQAHD AMSDVYATIA MAKLIKETHP KLYDYFFGLR KKNNVMAQLK LGSNTPVVHV
SGMFPALQGC ASYVMPITQH PSNKNAVIVV DLNKDLSGLA TLSIEQIQTY LYTPSIDLPE
GIERPAIKLI HINKCPIIAP AKTLTEERAD QLGIDRKQCR RSLDFLSNQP ELAEKLQKVF
IQETPSTENK SVEEMLYSGG FLSAADKALS EEVCNSTWPA LGNKEFNFED DRLGILLWHY
RARNAPDSLD VAEQEKWARH RQNYLLENSE AYIEKLEALA LENQSNPEKI ELLKQLYDYL
NYLNYE