Gene Ping_2432 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2432 
Symbol 
ID4626398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2979810 
End bp2980601 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content40% 
IMG OID639797568 
Productglutamine ABC transporter extracellular solute-binding family 3 protein 
Protein accessionYP_943763 
Protein GI119946083 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.151494 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0748361 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTAT GTAAAGTATT AGGAAATGTA TTCACCTCTT TATTGTTAGT GTTTACGATC 
CACTCAGCGC AAGCTAATCA GCTCGAATCT ATTAAAAAAG CGGGGGTGTT AAGAGTGGCT
GTCCCACAAG ATTTTCCACC TTTCGGCTCT GTTGGTACTG ATTTCAAACC TCAAGGTTAT
GATATTGACA TGGCTGCCTA TTTAGCCGAT GAATTAAATG TGGAGCTTGA ACTTGTTGCT
GTCACCAGCG CTAACCGCAT ACCTTACCTA CAAACACGTA AAGTGGACCT GGTGATATCG
AGCCTGGGTA AAAATCCAGA GCGCGAAGCT GTTATTGATT TTAGTTCAGC TTATGCGCCA
TTTTTCCTTG GTGTCTTTGG TACCGATAAT GAAATGGTGT CTTCGCCAGC GGATCTTAAG
AATAAAACAG TCGGTGTTAC CAGAGGTTCA GTGGAAGATC TTGAATTGAC TAAACTGGTC
TCCTCAACGA CGACTCTGCA ACGTTATGAA GATAATAATG CAACATTATC AGCCTTTTTA
TCTTCTCAAG TGAGTCTTAT TGCGACAGGT AACTTAGTGA TTGCTGAAAT TGCCACTCGC
TTTCCAGAAA AAGCGCCTAA AACAAAATTT TTATTAAAAA ATTCACCTTG TTATATCGGT
GTGATGAAAG GTGATGCTGT ATTGCTTAAA GAAATTAATC GTCTTGTTGC TAAAGCTAAA
CAAGTTGGTG TACTTGAAGG ATTTTCACAG AAATGGTTAA AAGCCCCATT TCCTGCAGAC
CTCAGCGCAT AA
 
Protein sequence
MKLCKVLGNV FTSLLLVFTI HSAQANQLES IKKAGVLRVA VPQDFPPFGS VGTDFKPQGY 
DIDMAAYLAD ELNVELELVA VTSANRIPYL QTRKVDLVIS SLGKNPEREA VIDFSSAYAP
FFLGVFGTDN EMVSSPADLK NKTVGVTRGS VEDLELTKLV SSTTTLQRYE DNNATLSAFL
SSQVSLIATG NLVIAEIATR FPEKAPKTKF LLKNSPCYIG VMKGDAVLLK EINRLVAKAK
QVGVLEGFSQ KWLKAPFPAD LSA