| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_2431 |
|---|
| Symbol | |
|---|
| ID | 4626397 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | - |
|---|
| Start bp | 2979115 |
|---|
| End bp | 2979783 |
|---|
| Gene Length | 669 bp |
|---|
| Protein Length | 222 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 639797567 |
|---|
| Product | ABC polar amino acid transporter inner membrane protein |
|---|
| Protein accession | YP_943762 |
|---|
| Protein GI | 119946082 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.460682 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0698059 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTATA ATCTTGATTT TTATGGGTTG GTTCCTTATC TGCCACAGTT TGTGGCAGGT
GTAGGTACAA CAATACAACT AACGGTTATT TCTACCGTTT TAGGGTTAAT ACTCGGAACA
TATTGTGCGG CAGGGCGTAT TAGTAAAGCG CGTTGGTTAA ATTGGATTTG CGCTGTTTAT
ATCGAAGTGA CGCGAAATAC GCCCTTTATT ATTCAATTGT TTTTTATCTT TTTTGGGCTG
CCCGCATTAG GGATTAAGCT TTCTGCATGG CAGGCAGGAA TGATTGCGAT GGTGTTTAAC
TTAGGTGCTT ACAGTGCCGA AATTATTCGC GCAGGTATTG AGGCAACGGC AATAGGCCAA
TGGGAAGCGG CAAAAACCTT AGGTCTTACA CACCGCCAAA TTTTTATGCA TGTTATTTTG
CCACCCGCCT ATCAACGGGT TTATCCGGCA CTGGTCAGTC AATGTATTAT TGTGATGTTA
GGCTCCGCCG TGGTGTCACA AATATCAGTC GAAGAACTTA CTTTTGCGGC AAACTTTGTT
CAATCGCGCA GTTTTTTGAG TTTTGAATCT TATATGTTAA CAGCGCTGAT TTACCTTTTT
TTAGCGATTT TAATGCGTCA ACTATTCTCA CTGCTGAAAA AATTCATCTT TAAATCATCT
GCTGTATAG
|
|---|
| Protein sequence | MSYNLDFYGL VPYLPQFVAG VGTTIQLTVI STVLGLILGT YCAAGRISKA RWLNWICAVY
IEVTRNTPFI IQLFFIFFGL PALGIKLSAW QAGMIAMVFN LGAYSAEIIR AGIEATAIGQ
WEAAKTLGLT HRQIFMHVIL PPAYQRVYPA LVSQCIIVML GSAVVSQISV EELTFAANFV
QSRSFLSFES YMLTALIYLF LAILMRQLFS LLKKFIFKSS AV
|
|---|
| |