Gene Ping_2427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2427 
Symbol 
ID4626393 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2975809 
End bp2976816 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content42% 
IMG OID639797563 
Productbile acid:sodium symporter 
Protein accessionYP_943758 
Protein GI119946078 
COG category[R] General function prediction only 
COG ID[COG0385] Predicted Na+-dependent transporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0574524 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0414588 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATAA TAAAAAAAAT AAAAAAAGAG TGGTTTTTGG TCGGCATGGT TGCCGCTATT 
TTATTAGCGA TAATAACCCC TGATGTGGGA CGTTCTGGTG GTTTTATTCA CCTTAATCAA
CTGACCGGTA TTGGCGTGGC TATCGTCTTC TTTCTCCATG GTTTAGGTTT GTCACCTGCT
GCGATCAAAG CCGGGATTAG TAACTGGCGA TTACATATTT ATATTCAGCT GGCAACCTTC
TTGCTCTATC CCTTAATTTG GGTCGTATTC GGTGACAGTT TTCTTGCCTA CATGCCGCCT
GCATTGGCAT TCGGTTTTTG TTATCTTTTT GTGCTGCCAA GTACGATTTC CTCTTCCGTA
GCAATGACTA GTGTCGGCAG AGGGAATGTG CCGGGCGCTA TCTTTAATGC TTCTCTCTCA
AGTATTCTGG GTGTTTTTAT TACCCCGTTA TTAATTCAGC TTTTTATGGG TTTTGAAGGA
GTAGAGCTGG ATCTAATGGC ATCGGTTATA TCCATTTCTA AATTACTTTT ACTACCAATG
ATTGCAGGGC AAATTGCCCG GCCTTTTCTG CTTGCTCTGG CTGAAAAACA TAAAAACATC
GTCGGTAAGG TGGATAAATA CGTCATCTTA CTGATTGTTT ATAACGCTTT TTGTGATTCA
GTTGCTAATG GAATTTGGCA GGAATTTTCA CTGGGATTAT TAGTGACATC CTTTGTGATT
TGTACTGTGA TTCTTTTGAC CATGGTGCAT TCGCTGCAGT GGGGGGCGCG TCGTTGCAAG
TTTGATTTAC CCGATGAAGT TGCCGCCGTG TTCTGCGGAA CGAAAAAAAC GCTGGCTGCA
GGTATCCCTA TGGCTAAAGT TATCTTCGGT GCTGATCCAA AGCTTGGCAT GATTCTATTA
CCTATTATGC TTTATCACCC TATACAAATT TTCTACTGCG CAATGTTGGC TAACCGTTAT
GTAAAACAAA GTGAAAAGAA CCAACAGCTA GCGGCTAAGC AGCCATAA
 
Protein sequence
MNIIKKIKKE WFLVGMVAAI LLAIITPDVG RSGGFIHLNQ LTGIGVAIVF FLHGLGLSPA 
AIKAGISNWR LHIYIQLATF LLYPLIWVVF GDSFLAYMPP ALAFGFCYLF VLPSTISSSV
AMTSVGRGNV PGAIFNASLS SILGVFITPL LIQLFMGFEG VELDLMASVI SISKLLLLPM
IAGQIARPFL LALAEKHKNI VGKVDKYVIL LIVYNAFCDS VANGIWQEFS LGLLVTSFVI
CTVILLTMVH SLQWGARRCK FDLPDEVAAV FCGTKKTLAA GIPMAKVIFG ADPKLGMILL
PIMLYHPIQI FYCAMLANRY VKQSEKNQQL AAKQP