| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_2421 |
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| Symbol | |
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| ID | 4625967 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | + |
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| Start bp | 2967655 |
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| End bp | 2969388 |
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| Gene Length | 1734 bp |
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| Protein Length | 577 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 639797557 |
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| Product | ABC transporter for oligopeptide ATP binding protein |
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| Protein accession | YP_943752 |
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| Protein GI | 119946072 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
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| TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0000293811 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCATAAGC ATAAGCAGAA ACAGAAGCAT AACAATAATA ACAAAGGTGT CTTACTCAGT
ATCAGTAATC TGTCTATCGA TTTTGAAACG AGTAAGGGTA CTGTTAGGGC CGTTGAAGAT
GTCAGCTTTA CCTTATCTAA GGGGGAAATA TTAGCACTGG TTGGAGAAAG CGGCAGCGGC
AAATCGGTTA CAGCTTATAG TATACTTAAC CTGCTGGATC AAAATGGTCG TTTAGCTGCG
GGAGAGATAA TCTATCATGG TATGTCTTTA CACAATGCCG ATAGCCAACT GCTTAGTGAG
GTTCGTGGTA GAGAAATAGC CATGATTTTC CAGAACCCGA TGTCAACGTT AAATCCTATC
CGTAAAGTGG GCGAACATTT GCGCGATATG CTGCGTACTC ATGGCTACCC ATCTTGGTCA
ACAATAGATG CTGAAATAGA AAAACTGCTG CATCAGGTCG AGATTTTAGA TGTTGAGCGA
GTGAAAAATG CTTATCCCTT TGAACTGAGT GGTGGCATGT GCCAACGGGT GATGATAGCA
CTGGCATTAG TGTGTCGCTC TCGAATGTTA ATTGCCGATG AGCCGACAAC CGGCCTTGAT
GTAACAACTC AAAAATCTAT AATGAATCTT ATTCATAACC TTGTAAAAGA AGAGGGACTC
GCCGTTATTT TAATCACTCA TGATCTTAGC CTTGCAGCAC AGTACTGCGA TAAGTTTGTT
GTGATGGAAA AAGGCCGAGT AGTAGAGCAG AATAGCCGAG ACAAATTTTT TAGTGAATCC
AAGCATCCAT ATACCCAAAA ATTATTATTG GCGACACCAT CAAGAAGTGC TTCGGTAGCC
GGTCTGACGG CTCAATCCCC CTCCTATCTT AAGCTACCAG AGCCCGTTAT TCCTAAGCAG
CCTCTGCTTG AAGTACACGG ACTGCGTAAA ATATATGGCC AAAATAAAAA ATCTTGGTTG
CCCTATCAAT CATCGACTAG CGAATTTGTG GCCGTTGCGG GCAGTGATTT TAGTATTTTT
CCTGGAGAAT GCGTTGGTTT AGTCGGCGGC TCCGGGTGTG GGAAATCGAC CACCACTCGA
ATGTTAAGTC GTTTAGAGGA TCCCTCTGCC GGGCGTATAG TCTTTGATGG TATTGATATT
ACTCAGGTAT CCAGCCATGA TTTTATAAAA CACCCTCTGC GTAAAGAAAT ACAAATGGTT
TTTCAAGACC CGACAGGATC GTTAAACCCG CGCCATTCAG TACTCGACTT AATTGCTGAA
CCACTATTAC GACTTGGCCC AAAAATGAAA AGGACAGAGA TTAACAGTAA AGTGCATAGT
TTGGCCGAAC AGGTTGGTTT ACCCTTAACC CTTATTGATC GTTTACCGCA CCAATTAAGT
GGCGGACAAA AGGCGAGAGT AGGCATTGCA CGCGCGATCG CACTTGAACC TAAGTTATTG
ATTTTAGATG AGCCGACCTC CGCATTAGAT GTTTCCGTAC AGGCCACGGT ATTACAGTTA
CTAGAGCACT TTCGGCGCAA GCTTGGTTTA AGTTACTTAT TTGTAAGCCA TGATTTGCAC
GTTGTTAAAA TGCTCAGTCA GCGAATATTG GTAATGAAAG AGGGGGAAAT AATTGAGCAA
GGCGATACTG AAACGGTGAT GAATAGTTCA GTACACCCTT ATACTAAAGC ATTGATGGAC
GCTATACCGA TAGAAACTGA ACAACAGATG ATAAATAAGC AAGAGTGCGC TTAA
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| Protein sequence | MHKHKQKQKH NNNNKGVLLS ISNLSIDFET SKGTVRAVED VSFTLSKGEI LALVGESGSG
KSVTAYSILN LLDQNGRLAA GEIIYHGMSL HNADSQLLSE VRGREIAMIF QNPMSTLNPI
RKVGEHLRDM LRTHGYPSWS TIDAEIEKLL HQVEILDVER VKNAYPFELS GGMCQRVMIA
LALVCRSRML IADEPTTGLD VTTQKSIMNL IHNLVKEEGL AVILITHDLS LAAQYCDKFV
VMEKGRVVEQ NSRDKFFSES KHPYTQKLLL ATPSRSASVA GLTAQSPSYL KLPEPVIPKQ
PLLEVHGLRK IYGQNKKSWL PYQSSTSEFV AVAGSDFSIF PGECVGLVGG SGCGKSTTTR
MLSRLEDPSA GRIVFDGIDI TQVSSHDFIK HPLRKEIQMV FQDPTGSLNP RHSVLDLIAE
PLLRLGPKMK RTEINSKVHS LAEQVGLPLT LIDRLPHQLS GGQKARVGIA RAIALEPKLL
ILDEPTSALD VSVQATVLQL LEHFRRKLGL SYLFVSHDLH VVKMLSQRIL VMKEGEIIEQ
GDTETVMNSS VHPYTKALMD AIPIETEQQM INKQECA
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