Gene Ping_2401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2401 
Symbol 
ID4625478 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2941097 
End bp2942323 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content46% 
IMG OID639797537 
Productacetyl-CoA acetyltransferases 
Protein accessionYP_943732 
Protein GI119946052 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID[TIGR01930] acetyl-CoA acetyltransferases 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.412675 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.536301 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGTCAC TGAATTTTAA CAATCTGAAA GAAGGTAATC TTATGAAAGA TGTCGTTATC 
GTAAGTGCAA AACGCACTGC AATTGGTTCT TATCTCGGTG TATTCAATAA TGTATCACCC
ATCGATCTGG CTGTCACAGC GGTAAAATCT GCCTTGGAGG CCGCAAATGT AACACCACAA
CAAGTCGATA ATCTGATTTT TGGTCATGTC TTTTCAGCAG GTCTTGGTCA GAACCCCGCT
CGCCAAATAG CTAAATTTGC AGGTATTCCC GATCAGGCAA CCGCCAATGT GGTCTCAATG
GTATGCGGAT CCGGATTAAA AGCGGTGATG GATGCGGTGC TGCAAATCCA AACGGGCGAA
TCAGAAATCG TTGTTGCTGG CGGTACAGAA TCGATGTCTA ATGCAGTATA TACCCTTGAT
TCACATCGCA CAGGCGCGAA AACGGGTAAC TCTCAACTGA CTGATATTGT ACTTAAGGAT
GGCTTAATTG ATGCGTTTAG TGGTTTTCAT ATGGGCATTA CCGCTGAAAA TTTAGCGAAA
AAATACCAAA TCTCCCGCGA AGAGCAGGAT GCATACGCGC TTCAATCTCA ACAGCGCGCA
GAAACAGCGA TAACATCCGG CAGATTTAAA AATGAGATTG CTGCGCACAT TATCTCAACG
CGCGGTGGTG ATACCATTGT TGATAGTGAT GAATACCCGC GTTTCGGGAT ACCACTTAAG
GTTATCAGTA AAGCACGTCC AGCCTTTAAA AAAGATGGCA CAGTGACGGC CGCAAATGCA
TCGGGTTTAA ATGATGGTGC AGCTGCCGTC GTTCTTATGA GTAAAGAAAA AGCGCTGGCA
CTGGGGTTAA CACCTATGGT CACTATTCGT GCGCAAGGTG CAGCTGGGGT TGATCCTGAT
ATTATGGGGT ATGGCCCCGT GCCGGCAACA CAAAAAGCGC TGAAAAAAGC TGGCCTGACG
GTTCAAGACT TGAATTTGGT TGAAGCAAAT GAAGCATTTG CATCTCAATG CCTGTCTGTT
ATCAAAGGCC TGGGTCTAGA CCCTGCTATT ACAAATGTAA ACGGCGGCGC AATTTCTCTT
GGTCATCCGG TCGGAGCCAG CGGTGCACGC ATACTTGTCA CCCTGCTTCA CGAACTGACT
AAGCGAAAAG AACGCTACGG ACTGGCGACA TTGTGTATCG GTGGAGGTCA AGGTGTTGCG
CTGCTTGTTG AAAATGAAAA TAGATAA
 
Protein sequence
MMSLNFNNLK EGNLMKDVVI VSAKRTAIGS YLGVFNNVSP IDLAVTAVKS ALEAANVTPQ 
QVDNLIFGHV FSAGLGQNPA RQIAKFAGIP DQATANVVSM VCGSGLKAVM DAVLQIQTGE
SEIVVAGGTE SMSNAVYTLD SHRTGAKTGN SQLTDIVLKD GLIDAFSGFH MGITAENLAK
KYQISREEQD AYALQSQQRA ETAITSGRFK NEIAAHIIST RGGDTIVDSD EYPRFGIPLK
VISKARPAFK KDGTVTAANA SGLNDGAAAV VLMSKEKALA LGLTPMVTIR AQGAAGVDPD
IMGYGPVPAT QKALKKAGLT VQDLNLVEAN EAFASQCLSV IKGLGLDPAI TNVNGGAISL
GHPVGASGAR ILVTLLHELT KRKERYGLAT LCIGGGQGVA LLVENENR