Gene Ping_2375 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2375 
Symbol 
ID4623709 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2891850 
End bp2892788 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content44% 
IMG OID639797513 
ProductABC transporter substrate-binding protein 
Protein accessionYP_943711 
Protein GI119946031 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA GAATAATCTT AAGTGCAGTT GCATTAATGT TAGCGCTGCC GGTACAGGCC 
GAGATGAAAA AATTGACCCT GATGCTGGAC TGGTTTGTTA ACCCCAACCA CGGACCCGTG
GTGATTGCCC AGCAGCGCGG TTATTTTAAA CAACAAGGCC TTGAGGTTGA TATTCAAGAG
CCGGGCGATC CGAGCATACC CGCTAAATTG GTTGCAGCCA ATAAAGTGGA TTTGGCTATC
TCTTATCAGC CTAGTTTAAT TATGGATGTG GCTGCGGGTC TGCCTCTTAT CCGCTCTGCG
ACTTTGATTG CTACGCCGCT TAATACTTTG ACCATATTAG ACAATAATAA GATTAAAAAA
CTATCTGATC TTAAAGGTAA AAAAATTGGC ATTTCCATTG CGGGTAATGA AGAGGCGACT
ATCAGCACGA TGTTGAAAAC ACAGGGTGTT AACTATGATG AGGTGGAGAT TATCAATATT
GGTTGGGCTT TGTCTGCCTC GCTTGCCTCG GGAAAGGTCG ATGCAACCTG GGGAGGATTC
CGCAATTTTG AAACAAACCA GCTAGCACTT GAAGGCATTA AGGCAAAATC TTTCTTCCCT
GAAGAGCACG GAGTACCGCC CTATGATGAA CTTGTCTTTG TAGCGAATGC CGACAGCTAT
GATAAAGCGG CGATTCTGGC ATTTAATAAA GCCCTGGAGC AGGCGACAAT CTACATTGTA
AACCACCCCG AAGAATCCTG GAAAGAGTTT GCGGCCTATG CGCCGGACAC TTTGAATAAC
GAGCTTAATA AACTCGCCTG GAACGCGACA TTGACCCGAT TTGCATTACG TCCGTCTGCG
ATTGATTTAC AGCGTTATGA TGATTATGCC CAGTTTATGT ATAGCCAAAA AATCATTAGC
ACACTGCCAA AAGCACAGGA TTATATTCCA ACATTTTAA
 
Protein sequence
MKKRIILSAV ALMLALPVQA EMKKLTLMLD WFVNPNHGPV VIAQQRGYFK QQGLEVDIQE 
PGDPSIPAKL VAANKVDLAI SYQPSLIMDV AAGLPLIRSA TLIATPLNTL TILDNNKIKK
LSDLKGKKIG ISIAGNEEAT ISTMLKTQGV NYDEVEIINI GWALSASLAS GKVDATWGGF
RNFETNQLAL EGIKAKSFFP EEHGVPPYDE LVFVANADSY DKAAILAFNK ALEQATIYIV
NHPEESWKEF AAYAPDTLNN ELNKLAWNAT LTRFALRPSA IDLQRYDDYA QFMYSQKIIS
TLPKAQDYIP TF