| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_2353 |
|---|
| Symbol | |
|---|
| ID | 4623559 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | + |
|---|
| Start bp | 2864283 |
|---|
| End bp | 2866979 |
|---|
| Gene Length | 2697 bp |
|---|
| Protein Length | 898 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 639797492 |
|---|
| Product | ATPase, P-type (transporting), HAD superfamily, subfamily IC |
|---|
| Protein accession | YP_943691 |
|---|
| Protein GI | 119946011 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0474] Cation transport ATPase |
|---|
| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01523] potassium and/or sodium efflux P-type ATPase, fungal-type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.234065 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.00179475 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACTA TTCGTAACTG GCATAATAAA ACTGTGGAAG AAACATTATC TGCACTAAAG
ACCACCCCTT CGGGTTTGAA CGAAACCGAG GTTAAGCTAC GATTAGCCGA TGTCGGTTTA
AACAAACTGC CAGAAGCAAA GCCCAAGCAT ATTGTTCTGC GCTTCATGTC TCACTTCCAT
AATATCCTGA TATACGTGCT GTTAGGCGCA TCTGCTATTA CGGCATCACT AGGACATTTA
GCTGACACGT TAGTCATCAT TACCGTGGTT ATTATCAATG CGCTTATCGG CTTCGTTCAA
GAGGGCAAAG CGGAAAAGGC CATGGATGCG ATACGGCATA TGCTCGCTTT GCGTGCCGCA
GTCATTCGTG ATGGCAAGCG TCAGACCATA AAAGGTGAAC AACTGGTACC TGGCGATATA
GTGTTACTCA AAGCGGGTGA TAAGGTGCCG GCGGATTTAC GCTTGCTGGA AACCCATGGT
TTACAGATTC AGGAATCAAT TCTTACGGGT GAGTCAGTAG CGGTAGAAAA GCAAACGGCA
TCTGTAGAGT GTCAGGCCTC GGTCGGTGAC CGTTTTTGCA TGGGTTTCAG TGGCACGACT
GTGACCAATG GTCAAGGTAT GGGGGTAGTC GTTACAACGG GAACCAATAC GGAAATTGGA
CGAATCAGTG GTTTGCTCAA AGATGTTCAA ACCCTAAATA CACCGTTAGT TGCACAAATG
GCAATTTTCG CCCGCTGGCT TACTCTGTTG ATCCTCTTTA TTGCCATGAT AATTTTGTTC
TTTGGTCACT TTGTATTACA GCACGCCTTC AACGAACTAT TTATTGCTGT CGTGGGACTT
TCGGTGGCTG CGATACCGGA AGGTTTACCT GCCGTGTTAA CCATTACTCT GGCGGTCGGT
GTGAAGGCCA TGGCACAGCA CAACACTATC GTTCGGCGAC TCCCGGCCAT CGAGACGCTG
GGCTCGGTCT CGGTTATCTG TTCCGATAAA ACCGGTACGC TTACTCGCAA CGAGATGAAT
GTAACCTCCA TTGTAACCTG TGAAGATCGT TTTGATATTA CAGGTGTCGG TTATCAACCC
ATTGGGAATG TCAAACGCAA TGAACAATCC GTAAAGTTGG AGCTTTATCC TGTTCTGCAA
GATCTGGGAC GCGTGGCCGC CCTGTGCAAT GATTCCGAGC TGGTTAAACA ACACAACGAC
TGGGTTGGGC AAGGAGATCC CATGGAGGTC GCTTTACTTG CACTTTCCGG CAAAGTTCGT
CCGGGTGACG ATCAGGTACG CAAGCAATGG TCGCGTACCG ACGTAATACC TTTTGATAGC
AAACATAAGT ACATGGCAAC GCTCAATCAT GACCATGAAA ACCACGCCTT TATCTTCATT
AAGGGAGCAC CAGAAACTAT TATTTCGATG TGCAGCCGTC AAAGTATTGG CAATAATGAA
ACAATAAAGC TGGATATTGA TTACTGGCGT AAGCAGGCAG ACGCTATCGC TCAAGAGGGG
CAGCGGGTTC TTGGCTTCGC GATTAAACCG ACTAATCTAG ATCATACCGT ACTAGAGCTG
TCTGATGTAC AGGATTCTCT TGTCTTTCTG GGATTGGCCG GTCTTATTGA TCCTCCGCGA
TCTGAAGCAA TACAAGCGAC CGCCGAGTGC CACCGGGCGG GTATTGATGT AAAAATGATC
ACTGGCGATC ATGCCGGGAC TGCACAAGCT ATCGGTAAAC AGCTTGGTTT GTGGCATTGC
GACAATGTAT TAACCGGGGC TGAGCTGGAT AAACTCGATG ATGCGGCACT CAAATCAATA
ATAAGCTACA CGGGTATCTT TGCTCGTACC AGTCCCGAAC ATAAATTACG TCTGGTGATG
GCTCTTCAGG CAAATAACAT GACGGTTGCC ATGACTGGTG ACGGTGTTAA TGATGCGCCT
GCATTGAAGC GTGCCGATGT CGGTATTGCC ATGGGTAAAA ACGGCAGTGA AGCTGCAAAG
GAAGCCGCTC ATGTTATATT GGCCGACGAT AATTTTGTTT CCATCATCAA AGCTGTTAAA
GAGGGAAGGA CGGTATACGA TAATATAAAA AAGGTCATCA GCTGGACACT GCCAACCAAT
GCCGGTGAGG CAATGACGAT CATACTTGCC CTATTACTTG GATTGAACCT GCCCATTACA
CCTATTCAGA TTCTTTGGGT GAATATGATT ACTGCCGTGA CGCTCGGTAT TGCCCTAGCC
TTCGAGCCTG CGGAAGAAAG CACTATGCGC CGTCCACCGC GGCCGCGGAA TCAAGGACTG
CTTAGTGGCG GTCTACTATG GCATATTGTG CTCGTCGCAA GCCTGTTTCT GGAGTGTATA
TTTGGGATTT ATGAATATGC GATCGCACAA GGTTATTCAG ATAATTTAGC GCGTACTATT
GCCATGGATA CGCTGGTCAC ACTGGAAATA TTCCACCTTT TATTTATCCG CAACATGAAT
ACAACATCAT TAAGCTTGAA AGCCATACGC GGCACCCCTA TTTTATGGAT ATTAATTGTC
ACTGTTATTC TCGGACAGGC TGCAATGACC TACCTCCCCT GGTTTCAAAG CGTGTTCAAA
ACTGAATCAG TCCATCTATT TGATGTCATA TTGATTATCT TTTTAGGCAT GTTGATGTTT
ACTATTATTG AGATTGAAAA ACAATTACGA CTTCGCATAC TGAAAAAACC GTTTTAA
|
|---|
| Protein sequence | MKTIRNWHNK TVEETLSALK TTPSGLNETE VKLRLADVGL NKLPEAKPKH IVLRFMSHFH
NILIYVLLGA SAITASLGHL ADTLVIITVV IINALIGFVQ EGKAEKAMDA IRHMLALRAA
VIRDGKRQTI KGEQLVPGDI VLLKAGDKVP ADLRLLETHG LQIQESILTG ESVAVEKQTA
SVECQASVGD RFCMGFSGTT VTNGQGMGVV VTTGTNTEIG RISGLLKDVQ TLNTPLVAQM
AIFARWLTLL ILFIAMIILF FGHFVLQHAF NELFIAVVGL SVAAIPEGLP AVLTITLAVG
VKAMAQHNTI VRRLPAIETL GSVSVICSDK TGTLTRNEMN VTSIVTCEDR FDITGVGYQP
IGNVKRNEQS VKLELYPVLQ DLGRVAALCN DSELVKQHND WVGQGDPMEV ALLALSGKVR
PGDDQVRKQW SRTDVIPFDS KHKYMATLNH DHENHAFIFI KGAPETIISM CSRQSIGNNE
TIKLDIDYWR KQADAIAQEG QRVLGFAIKP TNLDHTVLEL SDVQDSLVFL GLAGLIDPPR
SEAIQATAEC HRAGIDVKMI TGDHAGTAQA IGKQLGLWHC DNVLTGAELD KLDDAALKSI
ISYTGIFART SPEHKLRLVM ALQANNMTVA MTGDGVNDAP ALKRADVGIA MGKNGSEAAK
EAAHVILADD NFVSIIKAVK EGRTVYDNIK KVISWTLPTN AGEAMTIILA LLLGLNLPIT
PIQILWVNMI TAVTLGIALA FEPAEESTMR RPPRPRNQGL LSGGLLWHIV LVASLFLECI
FGIYEYAIAQ GYSDNLARTI AMDTLVTLEI FHLLFIRNMN TTSLSLKAIR GTPILWILIV
TVILGQAAMT YLPWFQSVFK TESVHLFDVI LIIFLGMLMF TIIEIEKQLR LRILKKPF
|
|---|
| |